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Name : Lp16_0045 (Lp16_0045) Accession : YP_008119898.1 Strain : Lactobacillus plantarum 16 Genome accession: NC_021514 Putative virulence/resistance : Unknown Product : cassette chromosome recombinase B Function : - COG functional category : - COG ID : - EC number : - Position : 50702 - 52348 bp Length : 1647 bp Strand : + Note : - DNA sequence : ATGATGGCTAGTGAATCAGTAGGAAAAAAGGCGAAACGAGCGGTTGGTTATGTGCGGGTGTCAACCGCTGAACAAGCTGA TGAAGGTTTTAGTGTTGCCGCACAGGGTGAACTAATTCGGCAGGAATGCACTCGGTATGGCAATGAAATGCAATTTGTTA AGCTATACGCTGATGAAGGTATTTCGGGTAAGTCAATCAAACGGCGGCCCCAAATGCAACAATTACTCGCTGATGTGCAA GCGGGTGAGATTGATGCCGTGATCTGTTGGAATATCTCACGAATTGCTCGGAATGTTGCCAATTTGTTAGAGATTGTAGA TATCTTTGAACGCAATGATGTGAGTTTTATTTCCATCAATGAGAAGATGGACACGCAAACGCCCGCCGGGCGGTTAATGT TACAGATTATGGCTAGTATGGGTGAGTATGAACGCAATAATATTGCAGAGAATGTCTATATGGGTAGCCGTCGGCGAGCA GTAGAAGGTTGGAATAATAGTGGCTTAGTCTTAGGTTATGACAATGTCGTGGATGAGGATGGTAATCACACCTTGCAGAT CAATCCTGATGAGGCTAAGATCATTAGGCATATTTTTGATTTAGCAGCGTTAGGCAAAGGGTTACGAGCAATTGCCAATG AATTGAATCAGACAGGGAACCGAACTAAGCGAGGGAATGCTTTTTCAACAACTGCGGTGAAGGCAATTTTAACGAATCCA TTATATGTGGGTAAAGTTCGTTATGGTCAGTATCGGCATTGGGATAAGAAACGACGGCATGGCAAACAAGCTGATTATGT CTTAGTTGACGGCCAGCACCCCGCGATTATTGAACCTCAACAATGGTCACGGGTTGTGTCATTAATGAAACAGCGCCATA AGTTACCGGCTTGGACTAGACAAGGTAGTAATGTCCTGACAGGACTCCTACGGTGTCCCGAATGTGGCGGACCGATGGCC GCCGCTAATACGACGAATCGCTTAGCTAATGGAACCCGGAAACGAATTCGGTACTATTCATGTGCTAATTTTCGAAATAA GGGGGCGGCGGTTTGTCATGCAAATTCAATTCGAGCTGAAGAGGCGGAGCAATTAGTGCAGGAGAAATTGTTGCAAGTAC TTGGAATGCCCAAAATTGGTCAGCAAGTCATTAAGCAGATGAAAGACTCCCGCCAGGAGCGGTGCCAAAGCTTGAAACGC CAACAATGTACTAATCAAGCCGAGCAAACGCGATTAGAGGAAAATATTCAAGAATATGAACGACTCATGACTGATAATCA TGAGTTGCAGGCAGCGATAAGACCGCGAATGGAGGCCTTGGAAAATCAATTAGATCAGTTACACGCAGATTCTCAGCAAG TGGCTAAGCAATTAGCGCAAGTGGATCAATTACCCAAGCCGAAATCGATTGATAGTTTATTGGCATTGGTGGTGAAATTG ATTAAGTCAGCCGAGAAGGATACTTTAAAGCAACTGTATCAAGCGTTTATTCGACAGATTACCTTTAATCGTCAACAGAA GTTAGTCTGGATTACAGTGGCTTTTGATGACGACGTCATCCAGCAATTGAAGACACAAAGCAAGGCAGTTGAACTCGATA AGGGTTCAACTGTTTTTTCGGTTTCAGCATTTACGTTTAAATTTTAA Protein sequence : MMASESVGKKAKRAVGYVRVSTAEQADEGFSVAAQGELIRQECTRYGNEMQFVKLYADEGISGKSIKRRPQMQQLLADVQ AGEIDAVICWNISRIARNVANLLEIVDIFERNDVSFISINEKMDTQTPAGRLMLQIMASMGEYERNNIAENVYMGSRRRA VEGWNNSGLVLGYDNVVDEDGNHTLQINPDEAKIIRHIFDLAALGKGLRAIANELNQTGNRTKRGNAFSTTAVKAILTNP LYVGKVRYGQYRHWDKKRRHGKQADYVLVDGQHPAIIEPQQWSRVVSLMKQRHKLPAWTRQGSNVLTGLLRCPECGGPMA AANTTNRLANGTRKRIRYYSCANFRNKGAAVCHANSIRAEEAEQLVQEKLLQVLGMPKIGQQVIKQMKDSRQERCQSLKR QQCTNQAEQTRLEENIQEYERLMTDNHELQAAIRPRMEALENQLDQLHADSQQVAKQLAQVDQLPKPKSIDSLLALVVKL IKSAEKDTLKQLYQAFIRQITFNRQQKLVWITVAFDDDVIQQLKTQSKAVELDKGSTVFSVSAFTFKF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccrB3 | BAB46972.1 | cassette chromosome recombinase B3 | Not tested | Type-IIIinv SCCmec | Protein | 1e-93 | 41 |
| ccrB3 | BAB47597.1 | cassette chromosome recombinase B3 | Not tested | Type-III SCCmec | Protein | 1e-93 | 41 |
| ccrB3 | YP_005754051.1 | site-specific recombinase CcrB3 | Not tested | Type-XI SCCmec | Protein | 5e-95 | 41 |
