Gene Information

Name : Lp16_2762 (Lp16_2762)
Accession : YP_008122556.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Virulence
Product : choloylglycine hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2957257 - 2958231 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence : 
ATGTGTACTGCCATAACTTATCAATCTTATAATAATTACTTCGGTAGAAATTTCGATTATGAAATTTCATACAATGAAAT
GGTTACGATTACGCCTAGAAAATATCCACTAGTATTTCGTAAGGTGGAGAACTTAGATCACCATTATGCAATAATTGGAA
TTACTGCTGATGTAGAAAGCTATCCACTTTACTACGATGCGATGAATGAAAAAGGCTTGTGTATTGCGGGATTAAATTTT
GCAGGTTATGCTGATTATAAAAAATATGATGCTGATAAAGTTAATATCACACCATTTGAATTAATTCCTTGGTTATTGGG
ACAATTTTCAAGTGTTAGAGAAGTGAAAAAGAACATACAAAAACTAAACTTGGTTAATATTAATTTTAGTGAACAATTAC
CATTATCACCGCTACATTGGTTGGTTGCTGATAAACAGGAATCGATAGTTATTGAAAGTGTTAAAGAAGGACTAAAAATT
TACGACAATCCAGTAGGTGTGTTAACAAACAATCCTAATTTTGACTACCAATTATTTAATTTGAACAACTATCGTGCCTT
ATCAAATAGCACACCCCAAAATAGTTTTTCGGAAAAAGTGGATTTAGATAGTTATAGTAGAGGAATGGGCGGACTAGGAT
TACCTGGAGACTTGTCCTCAATGTCTAGATTTGTCAGAGCCGCTTTTACTAAATTAAACTCGTTGCCGATGCAGACAGAG
AGTGGCAGTGTTAGTCAGTTTTTCCATATACTAGGGTCTGTAGAACAACAAAAAGGGCTATGTGAAGTTACTGACGGAAA
GTACGAATATACAATCTATTCTTCTTGTTGTGATATGAACAAGGGAGTTTATTACTATAGAACTTATGACAATAGTCAAA
TTAACAGTGTCAATTTAAACCATGAGCACTTGGATACGACTGAATTAATTTCTTATCCATTACGATCAGAAGCACAATAC
TATGCAGTTAACTAA

Protein sequence : 
MCTAITYQSYNNYFGRNFDYEISYNEMVTITPRKYPLVFRKVENLDHHYAIIGITADVESYPLYYDAMNEKGLCIAGLNF
AGYADYKKYDADKVNITPFELIPWLLGQFSSVREVKKNIQKLNLVNINFSEQLPLSPLHWLVADKQESIVIESVKEGLKI
YDNPVGVLTNNPNFDYQLFNLNNYRALSNSTPQNSFSEKVDLDSYSRGMGGLGLPGDLSSMSRFVRAAFTKLNSLPMQTE
SGSVSQFFHILGSVEQQKGLCEVTDGKYEYTIYSSCCDMNKGVYYYRTYDNSQINSVNLNHEHLDTTELISYPLRSEAQY
YAVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 3e-110 71
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 2e-110 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lp16_2762 YP_008122556.1 choloylglycine hydrolase VFG2162 Protein 3e-114 68