Gene Information

Name : Lp16_2647 (Lp16_2647)
Accession : YP_008122444.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Resistance
Product : copper transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2824601 - 2826640 bp
Length : 2040 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGACATGGATATGCAACACATGGCGCACCATGATTCAAATGACATGGGCGATATGGATATGGGTAACGGTGAGAT
GATGCACATGGGCAATCTCAAGTTGAAGTTTTGGGTAGCGTTAGTTCTGACGATTCCGATTATCATTATGAGTCCGATGA
TGGGGGTCAATTTACCATTTCAAATCGTTTTTCGGCCATGGTCCGATTATATCGTCGCAATTTTAGGCACAATCCTGTTT
CTATACGGTGGGCAACCGTTTTTCAGCGGTGCCAAGGCGGAGGTCAAAAATCATAAGCCTGCCATGATGACGTTGATTAC
AATGGGTATCAGTGTGGCGTACGTTTACAGTATCTATGCTGTGGTTGCCAATGACTTGTTAAATGCAAAACCAATGGTGA
CCGATTTCTTCTGGGAACTAGCGACTTTGATCGTCATCATGTTGTTAGGCCACTGGATCGAGATGAATACGGTCATGAAT
GCGGGATCGGCGGTAGATAAACTAGCAAAACTGTTACCAAGTACGGCACATAAGTTAGTTGATGGGCAGGTCCATGACGT
GGCAATTGCTGATCTAGCTAATGGTGATCAAGTTCAGGTCCGGGCTGGTGAACAAATTCCAGCTGACGGCACAGTGTTAA
ATGGTGCGACTAGTGTGAATGAAGCGATGGTTACTGGTGAAGCTAAGTTAGTTGAAAAACGCGCTAAGGATCAAGTTGTG
GGTGGTTCAGTCAATGGTGATGGGACGTTTGAGATGAAAGTCACCGGGACTGGTGAATCCGGATACTTAGCCCAAGTCAT
GAAGTTAGTCAGTGACGCACAGGCGGCCAAATCGTCGCAAGAAAATATGGCGGATAAAGTGGCCGGACTCTTGTTCTACG
CTGCCTTGACCGTTGCAATCGTTGCCTTTATCGTCTGGTTACTCGTGGGCAATCTGGCGTTAGCACTATCAATTGCGGTG
ACAGTGCTCGTGATTGCTTGTCCTCACGCTTTAGGATTGGCAATTCCATTGGTAGTGGCACGGAGTACGGCGATTGCGGC
CAGCCACGGGTTACTGATTCGTAATCGGGATGCGATGGAACAAGTCAAAAAGTTGAACTACGCGTTGATGGATAAGACCG
GGACATTGACAGCTGGTAACTTTAAGGTCGCTGATTATCAAAGTATCGCCGACCGGCTAACTGCGGACGCAGTCTTGGCG
ATGATGGCCGGTTTGGAAAATGGCTCTAGTCATCCCTTAGCTGTCGGAATTCTTGCTGCCGCTAAGGAACATCAGTTAAC
CCCTAAGGTTAGTCAGGATGTTCATCAGATTACTGGTGTCGGGTTAAGCGGCACGATTGATGGGCAGACGTATCAGATCG
TTTCGGCAGCTTACTTGGATAAACAAAATTTAGCCTATGACCAGCAAACGTTCAATCGACTGGCAAGTGCCGGTAACTCA
GTCAGTTTTTTGATTCAGGAGCAGACAGTCTTAGGTTTTGTCGCTCAGGGTGACCAGATCAAGCCGGAAGCCAAGAACTT
GATCGATAGTTTGAAGGCCCAAAACATTACCCCAGTAATGCTAACCGGTGATAATCCGCAGAGCGCCCAAGTCGTTGCTA
AGCAGCTCGGAATTACAGAAGTGCATGCGGGTTTATTGCCCGAAGATAAGGCTAAGCTCGTTCAACAGTATCAGGCTGAT
GGTAGCCACGTTATGATGATTGGCGATGGTGTTAACGATGCCCCTAGTCTGGCCCGGGCAGATATTGGCGTTGCCATTGG
GTCTGGGACTGACGTTGCTATTGATTCTGCTGATATCGTTCTCGTTAAGAGTAATCCAAATGATGTGGTCGATTTCTTGG
CTCTGGCCCGGCGAACGACCCGGAAGATGGCGCAAAATTTATGGTGGGGTGCTGGATACAATGTCATCACAATCCCCTTG
GCTGCTGGTATTCTCGCACCACTCGGCTTTATTTTGAACCCGATGTTTGGTGCGGTAGTGATGTCATTAAGCACGGTAAT
CGTGGCAATTAATGCGATGACGTTACGATTAAAAGACTAA

Protein sequence :
MKDMDMQHMAHHDSNDMGDMDMGNGEMMHMGNLKLKFWVALVLTIPIIIMSPMMGVNLPFQIVFRPWSDYIVAILGTILF
LYGGQPFFSGAKAEVKNHKPAMMTLITMGISVAYVYSIYAVVANDLLNAKPMVTDFFWELATLIVIMLLGHWIEMNTVMN
AGSAVDKLAKLLPSTAHKLVDGQVHDVAIADLANGDQVQVRAGEQIPADGTVLNGATSVNEAMVTGEAKLVEKRAKDQVV
GGSVNGDGTFEMKVTGTGESGYLAQVMKLVSDAQAAKSSQENMADKVAGLLFYAALTVAIVAFIVWLLVGNLALALSIAV
TVLVIACPHALGLAIPLVVARSTAIAASHGLLIRNRDAMEQVKKLNYALMDKTGTLTAGNFKVADYQSIADRLTADAVLA
MMAGLENGSSHPLAVGILAAAKEHQLTPKVSQDVHQITGVGLSGTIDGQTYQIVSAAYLDKQNLAYDQQTFNRLASAGNS
VSFLIQEQTVLGFVAQGDQIKPEAKNLIDSLKAQNITPVMLTGDNPQSAQVVAKQLGITEVHAGLLPEDKAKLVQQYQAD
GSHVMMIGDGVNDAPSLARADIGVAIGSGTDVAIDSADIVLVKSNPNDVVDFLALARRTTRKMAQNLWWGAGYNVITIPL
AAGILAPLGFILNPMFGAVVMSLSTVIVAINAMTLRLKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 4e-151 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lp16_2647 YP_008122444.1 copper transporting ATPase BAC0079 Protein 4e-170 56
Lp16_2647 YP_008122444.1 copper transporting ATPase BAC0383 Protein 8e-143 49
Lp16_2647 YP_008122444.1 copper transporting ATPase BAC0629 Protein 3e-126 47