Gene Information

Name : Lp16_2550 (Lp16_2550)
Accession : YP_008122351.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/oxidoreductase,atypical SDR family, TMR-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2727205 - 2728086 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGGGCGAGTTAAATTGAAATATGCGATTACAGGTGCCACTGGTCATTTAGGACAACAGATTGTTGCCGCGATGAG
ACCGTTAGTCGCCACCACTGAATTATATTTAGGGGTCCATACACTCAGTAAGGCCCAGGTATACCAACAACAAGGTTTGC
ATGTTGCGGCTATTGATTACCAGCAGCCAGAGCAGTTACGCGCATTTTTCCAAGACAGTGATGTCCTGATCTATATTCCT
AGTAAGAGTCATGATAGTTATTCGCGGGTCCAAGAATTTGAGAACGTCTTAGCAGCAGTCCAACAGGCGAATGTGCATCA
TTTCCTAGTCATGGGTTTCATTGCCGATCAGGTGAATAATCCATTTGCATTATCAGCATTTTATGGTTACGTGCCCCGGC
GATTAGCTGGAAGTGATATTAACTATACGATTGTCCGGAATGCGCTTTACGCGGATCCGTTAGTGCCATATTTGCCAGAA
TTAATTGAACGGCACAACGTCGTTTATCCAATGGCTGATCAGGCTCTCAGCTTCATCAGTCAGGCAGATAGTGCGGCCGC
TTTTGCTAAAGTCGCCACAACGCCTGATTTATTACAACGTGGTCGAATCTATACGTTAACACAGTCCCGAGCTTACACGA
TGCCGGAACTCGCTACTGTGCTTAGTCAGGTGAGCGGGCAACCAATCGGGTATCGACCAGTGTCCTTGCAAGCCTTCAGC
GATATGTACAATCAGAATGGTGAGGGGCCAATGTTGGCCTCGATGTATGCCGGTGGCGCCCGCGGACTATTAGCCACAGT
AAGTGATGATTATCAGCTGATTATGGATCGTCCCGCCCAGTCATTGCTGGATTACTTACAAACAAATTATCAGAAAAGTT
AA

Protein sequence :
MKGRVKLKYAITGATGHLGQQIVAAMRPLVATTELYLGVHTLSKAQVYQQQGLHVAAIDYQQPEQLRAFFQDSDVLIYIP
SKSHDSYSRVQEFENVLAAVQQANVHHFLVMGFIADQVNNPFALSAFYGYVPRRLAGSDINYTIVRNALYADPLVPYLPE
LIERHNVVYPMADQALSFISQADSAAAFAKVATTPDLLQRGRIYTLTQSRAYTMPELATVLSQVSGQPIGYRPVSLQAFS
DMYNQNGEGPMLASMYAGGARGLLATVSDDYQLIMDRPAQSLLDYLQTNYQKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SACOL0467 YP_185357.1 hypothetical protein Not tested vSa¥á Protein 4e-48 41
NWMN_0387 YP_001331421.1 hypothetical protein Not tested vSa¥á Protein 4e-48 41
SAUSA300_0394 YP_493108.1 FAD/NAD(P)-binding Rossmann fold superfamily protein Not tested vSa¥á Protein 4e-48 41
SAS0383 YP_042508.1 hypothetical protein Not tested vSa¥á Protein 6e-49 41
MW0381 NP_645198.1 hypothetical protein Not tested vSa¥á Protein 6e-49 41
SAKOR_00403 YP_008490587.1 Putative nucleoside-diphosphate-sugar epimerase Not tested vSa¥á Protein 4e-48 41