Gene Information

Name : Lp16_2454 (Lp16_2454)
Accession : YP_008122256.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2617126 - 2617872 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :
ATGAGTATTAAAGGTAAAGTGGTTGTTATTACGGGTGCGTCCAGCGGTATTGGTGCCGCCACGGCCAAGTTGTTAGCGGC
TAAAGGCGCTAAAGTTGTATTGGGGGCGCGTCGAGAAGAGCGGTTACAGGCCTTGAGTCAAGCGATTGGTGACAACGCGG
TCTATCAAGTAACTGATGTAACAGATCGGCAACAAGTTCGCGCTTTGATTGACTTGGCCGTTTCCAAGTTTGGGCGTGTC
GATGTGCTATATAATAATGCCGGTACGATGCCCCAGGGTAATCTGAGTGACCGTGAATACGATAAGTGGCAGATGATGTT
GAACGTGAATATTATGGGGGTTTTGAATGGAATTGGTGAAGTATTGCCAATCATGCAAAAGCAACATGATGGTTTGATTA
TCGCAACGGATTCAGTTGCCGGACACGTTGTTTATCCCGCATCAGCGGTGTATAACGGGACTAAGTATGCGGTCCGGGCC
ATTATGGAAGGCTTGCGACAGGAAGAAAAGGAACACGGAATTCGTTCAACCATCGTGTCGCCAGGTGCAGTTCGGACGGA
GTTGGTCAATACAATCGGCAATACGCAAATTCAGGCCGGTATCAGTGAGCTGATGAATGCGGACGATCGTCAAGGATTGG
CTTTAAATCCGGAAGATATTGCTAACGCGGTATTATTTGCGATCGATCAGCCTAAACACGTCGCCATTAGTGAAGTGTTA
GTACGGCCAGCACAACAGGAAGTTTAA

Protein sequence :
MSIKGKVVVITGASSGIGAATAKLLAAKGAKVVLGARREERLQALSQAIGDNAVYQVTDVTDRQQVRALIDLAVSKFGRV
DVLYNNAGTMPQGNLSDREYDKWQMMLNVNIMGVLNGIGEVLPIMQKQHDGLIIATDSVAGHVVYPASAVYNGTKYAVRA
IMEGLRQEEKEHGIRSTIVSPGAVRTELVNTIGNTQIQAGISELMNADDRQGLALNPEDIANAVLFAIDQPKHVAISEVL
VRPAQQEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 9e-40 49
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 1e-37 47