Gene Information

Name : Lp16_2448 (Lp16_2448)
Accession : YP_008122250.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Virulence
Product : iron chelating ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2612423 - 2613217 bp
Length : 795 bp
Strand : +
Note : -

DNA sequence : 
GTGAATACCATTGAAGCCCAAAATATTAGTATTGGTTATGGCGACAAGGTTATCGTCGATCAGCTATCAATTACGATTCC
GCATGGTCAGATCACTACGCTGATTGGCCCGAATGGTAGCGGTAAATCGACCCTCATTCGTGCCATCGCCCACCTATTGC
CACCAACAACCGGCGTTATTCTACTGGATCATCAAAACATTCAACAAATCAAAAGCAAAACTTTTGCGAAAAAGATTGCA
GTCTTACCACAGACGAACCAAACGGCTAACGATCTCACCGTAGAAGAACTGGTGAGTTTTGGCCGCTTGCCTTATCGGCG
GCCGTTAAATGGGCTCACCACAACTGACCATCAAAAAATCGAATGGGCGCTCACTCAGGCCAGCCTCCAAGATTTACGCC
AACGGCCCCTAAGCACCCTTTCTGGCGGACAACGTCAACGGGCATGGATCGCCATGGCCGTTGCTCAAGATACTGACACG
ATTATTCTGGATGAACCCACCACCTACTTAGATTTGACTCACCAATTAGAAGTGATGCAACTCGTCAAAAAGCTCAACGA
ACAGGCCCACCGAACTATCATTATGGCATTACACGACTTGAACCATGCAGCTCGCATCTCTGACCAATTAATCGCGCTCA
AAGACGGTCACGTTTTGGCCCACGGTCCCGTGTCCACCGTTATGACGGCCGCTAACTTAAAAAAAATTTTCAATATTGAT
GCCACCCTCGTTGACTACCACGGTACCCCACTGATTTTGACCTATAACGGCTGTCAGGAAGTGGCCCCCGCATGA

Protein sequence : 
MNTIEAQNISIGYGDKVIVDQLSITIPHGQITTLIGPNGSGKSTLIRAIAHLLPPTTGVILLDHQNIQQIKSKTFAKKIA
VLPQTNQTANDLTVEELVSFGRLPYRRPLNGLTTTDHQKIEWALTQASLQDLRQRPLSTLSGGQRQRAWIAMAVAQDTDT
IILDEPTTYLDLTHQLEVMQLVKKLNEQAHRTIIMALHDLNHAARISDQLIALKDGHVLAHGPVSTVMTAANLKKIFNID
ATLVDYHGTPLILTYNGCQEVAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-52 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-52 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-51 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-50 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-49 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-49 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-49 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-49 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-49 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lp16_2448 YP_008122250.1 iron chelating ABC transporter, ATP-binding protein BAC0164 Protein 8e-50 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lp16_2448 YP_008122250.1 iron chelating ABC transporter, ATP-binding protein VFG1042 Protein 8e-50 42