|
Name : Lp16_2252 (Lp16_2252) Accession : YP_008122064.1 Strain : Lactobacillus plantarum 16 Genome accession: NC_021514 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : - COG ID : - EC number : - Position : 2399238 - 2400500 bp Length : 1263 bp Strand : - Note : - DNA sequence : ATGAATGGCATGGCAGAAACGGCACAGTTAGAAGCTGCTGTACAGGCATTAAGCGATATTGTAAAAATGAATACGGTAAA TAACCATGAGCAATTGGTGGCGGATTATTTGGTCACACTTTTAAAGCAACATGGTATTGAAGCACAATCAATCGAGTACG CTCCCGGGCGGGTGAACTTGGTGGCCGAAATTGGTGATGGTCACGGTCCAGTCGTCGCGTTGGATGGTCATGAAGATACG GTGGCGTTGGGTGATGCAGATAAATGGCACACGGACCCGTTGGCAGCAACTATCAAAGATAATCGGTTGTATGGTCGCGG TGTGACGGACATGAAGGCTGGACTAATGGCTGAAGTTTTCGCGATGATTGCATTGCACGATCAAGACGTCCCACTCCATG GCACGGTGCGGTTACTCGCAACTGTGGGAGAAGAAGTCGACCATTTAGGTGCTGAACAATTGACGGAACTCGGTTACGCC GATGATATTCAAACGTTGATCTGTGCGGAACCAAGCGGTGCGGACAAACAGCTTTTACTGACCAAGTCGATTCAAGCCAT GTTAGGTGTTGACGACGATACGGCGCAACGGATGGCGGATGCGAATCCGACGACCGAACAACACTTCATCGAATTAGCGC ATAAGGGTTCACTGACTTATACGATTAAAGCGCAAGGGGTGGCGGCCCACAGTTCGATGCCAGCGATTGGTCAAAACGCC ATCGATATGTTGATGACTTACTATCAGAAACAAACCGCCTATTTTGACAGTTTCAAGACTATCGTTAATCCCGTATTGGG CCCAACCGTACCTGTCGTGACGTTAATTAGTGGTGGCGAACAGGTCAACACCGTCCCAGCCAGTGCCGAAATGTCAGTAA AAATTCGGACGATTCCAGAATTACGGAATGACCGCTTGATTAATGATTTGGAAGCCATCATTGCTGAATGCAATGCGGAT GGTGCCAATCTAACGATGGACATCGCAAGTTCGTTCTACCCAGTGCATACGCCGGAAGATAGCCAGTTGGTCCAGTTGGC GAAGAAGGTTGGGGAACAAGTCTTACAACAGCGGCTCCCGTACTTTGGTGCTCCTGGTGGGACGGACGCATCGTCTTATA TTGTAAAGAGTCCTGATATGCAAGTGATCGTCTTCGGACCCGGCAATATTACAGCGCACCAAGTTAATGAATATGTTGAT TTGGATATGTATGGGCGCTTCATCGAGATTTATCAAAAAATGATTACGGAATTGCTGGCTTAA Protein sequence : MNGMAETAQLEAAVQALSDIVKMNTVNNHEQLVADYLVTLLKQHGIEAQSIEYAPGRVNLVAEIGDGHGPVVALDGHEDT VALGDADKWHTDPLAATIKDNRLYGRGVTDMKAGLMAEVFAMIALHDQDVPLHGTVRLLATVGEEVDHLGAEQLTELGYA DDIQTLICAEPSGADKQLLLTKSIQAMLGVDDDTAQRMADANPTTEQHFIELAHKGSLTYTIKAQGVAAHSSMPAIGQNA IDMLMTYYQKQTAYFDSFKTIVNPVLGPTVPVVTLISGGEQVNTVPASAEMSVKIRTIPELRNDRLINDLEAIIAECNAD GANLTMDIASSFYPVHTPEDSQLVQLAKKVGEQVLQQRLPYFGAPGGTDASSYIVKSPDMQVIVFGPGNITAHQVNEYVD LDMYGRFIEIYQKMITELLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 5e-67 | 41 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 2e-66 | 41 |
