Gene Information

Name : Lp16_2226 (Lp16_2226)
Accession : YP_008122039.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2371096 - 2371776 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTCAACCAGTTTTAGCCTTACAAAATATTAATAAACAATTTGGTCACGGTCATACCGCTGTTAACGCTTTGACTGA
TGCCAATTTCGAAGTCAGTGCTGGCCAATTCGTCGCGATTATCGGCCCCTCTGGCTCAGGTAAATCCACCTTTTTGACGA
TTGCTGCCGGTTTACAAACGCCAACAAGTGGTCAAGTTATTCTGAACGGACAACCACTATCGAATCAAACGGAAAAACAG
CGCTTAGCCTACCGTTTCAATGAAATTGGCTTTATCTTGCAGAGTTCCAATCTAATTCCATTCCTGACGGTTCGTGAACA
GTTCAAGCTCGTCGATAAAATGGCCCGGCGCAAATTTGATCAAGCAGGCACCGATGGATTACTAGCAGAGTTAGCCCTTA
CTGAAGTTCGGGATGCCTACCCAAGTGACCTCTCCGGTGGTGAACGCCAACGTGTTGCCATCGCCCGTGCTCTTTACAAT
GATCCAAGCGTCATTCTCGCAGATGAACCGACCGCCAGCCTGGACACGCCCCGCTCCATCGACGTCGTCAAGCGCCTCGC
CAACGAAGCTCATCAGCACCAAAAGGCCATCGTAATGGTGACCCATGACCAACGGCTGATTGATGACTGTGACGTGGTCT
ATCAAATTGAAGATGGTAAGATGAGTCGCCGCGACTCGTAG

Protein sequence : 
MSQPVLALQNINKQFGHGHTAVNALTDANFEVSAGQFVAIIGPSGSGKSTFLTIAAGLQTPTSGQVILNGQPLSNQTEKQ
RLAYRFNEIGFILQSSNLIPFLTVREQFKLVDKMARRKFDQAGTDGLLAELALTEVRDAYPSDLSGGERQRVAIARALYN
DPSVILADEPTASLDTPRSIDVVKRLANEAHQHQKAIVMVTHDQRLIDDCDVVYQIEDGKMSRRDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-43 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-49 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lp16_2226 YP_008122039.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-35 42
Lp16_2226 YP_008122039.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-29 42