Gene Information

Name : Lp16_2156 (Lp16_2156)
Accession : YP_008121971.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2294282 - 2295040 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGACAACCACACCAATCATGACCGTCAGCGACCTGCACAAAACGTATGGTAAGGCGGGCAGCAAACAATACGAAGCGTT
AAAAGGCATTAATTTCAATGTGCAACCAGGGGAATTTGTCGGAATCATGGGCGCATCTGGTTCAGGGAAAACCACCTTGC
TCAATATGCTGGCCACACTGGACCAACCAACTAGCGGTGAAGTGACTATTCATCAACAACCGATTACACATCTGAAAGGC
AATCAACTTGCTGATTTCCGGGCCAAAGAGATTGGGTTTATCTTCCAAGATTTCAACTTATTAGAAACTATGACTGCTTA
CGAGAATATCGCCCTACCATTGTCGCTGCAAAATACGCCAGTCAAAAAGATCAAACCAGCTGTCGAAAAAGTCGCACACC
AATTGGGAATTGAAGAATTCCTATCAAACTATCCTAATGAATTATCTGGTGGTCAAAAGCAACGTGTGGCAGCCGCACGA
GCCTTAATCAATGACCCCGCTATTCTATTTGGTGATGAACCAACTGGTGCCCTTGATTCTAAGTCAGCGCGTGAATTACT
CGACCTGTTCACCAAAATCAACCAAGAACGGGCTGTCTCTATCTTGCTGGTGACCCATGACCCATTTTCAGCTAGCTTCT
GTCAACGAATCTTATTCATCAAAGATGGCCGGATTGGGCAAGAACTTAAACGTGGGGATTTAAGCCGCAGTGATTTTTAT
CAACAAGTCCTCGACAACCTAGGGACGTTTGAACAGTAA

Protein sequence : 
MTTTPIMTVSDLHKTYGKAGSKQYEALKGINFNVQPGEFVGIMGASGSGKTTLLNMLATLDQPTSGEVTIHQQPITHLKG
NQLADFRAKEIGFIFQDFNLLETMTAYENIALPLSLQNTPVKKIKPAVEKVAHQLGIEEFLSNYPNELSGGQKQRVAAAR
ALINDPAILFGDEPTGALDSKSARELLDLFTKINQERAVSILLVTHDPFSASFCQRILFIKDGRIGQELKRGDLSRSDFY
QQVLDNLGTFEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lp16_2156 YP_008121971.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-34 43
Lp16_2156 YP_008121971.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-43 42
Lp16_2156 YP_008121971.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-40 41
Lp16_2156 YP_008121971.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-34 41