Gene Information

Name : Lp16_1969 (Lp16_1969)
Accession : YP_008121785.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Unknown
Product : prophage P2b protein 1, integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2088109 - 2089266 bp
Length : 1158 bp
Strand : +
Note : -

DNA sequence :
ATGGCAACAATCAAGAAGTATCAGGACAAGGACGGGAATACCCGTTATCAGTTTCAAGTTTATTTAGGCGTTGATCCACT
AACGGGAAAAAAGAAAAATACCCGACGCCGTGGATTCAAGACAAAAAAAGAAGCCCAGATTGTATTATCAAGACTTGAAC
TTGATATTTACAATCATGGGCTACCAACTAAAAACGATAATACAATTTTTAAAGATATTTACCAGCTGTGGTTCACGCAA
TATAAACAAACGGTTAAGGAAAGCACTTGGGTAACGACTCAGCGGCTGTTCCGGCTTCATATTTTACCAATATTTAGTGA
TTACCGGATTGCTAAAATATCCATTAAGGATTGTCAAAAAGCCATAAATCAGTGGTTTAATGCTGGCTTAGTAAAGTATC
ATACTCTAATGAATTACGTTGCCAAGGTGCTTGATTATGCCATTAATATTGACTTGATCAGTGAGAATCCAGCCAAGCGC
GTTATTGTGCCAGTAAATAAAAATGATCGTTCACGCAAAAACTTAGAAAATTACTTTGATAAGGCTGAATTACAATACTT
CTTTGAGTGCCTGAATGATGATGACAATACACCGCAAGCCAATGTATTCTTTCGTTTAGCGGCCTTTACTGGTATGAGAA
AATCTGAAATGCTTTGCTTAGAATGGTCTGACATTGATTTTAGCAATCACACTATACGGGTTAATAAAACACAATCCCGT
GGTGATGGTGCCCGTCTGCTAGTACAAGCACCTAAGACAGCGCGTAGCAATCGGACAGTGTATTTAGATCCCACTACGAT
CAAAATATTGCAACACTGGCAAGTTGACCAAAAAGAATGGCTACTACGTTTCGGCTTTAACATCAATCAAGGTAACCACT
ATGTGTTTGCTAATGAAAATAACGAGATGTTTCAACCATCTAAGCCACGTAAATGGCTTGAGCATACTCTAACTAAATAT
GACTTGAAGCATGTTACGGTTCACGCATTCCGCCACACTTATGCGACGCTTGCATTTGAAGCCCATGCTTCCATCAAGTC
AGTACAAGACCAGTTAGGACATTCAAGCTATCGCACGACTTTAGATATTTACACCGCAGTTACTGCCAAGCAAAAAAACG
AAGCCACTGAAAAACTGGCTAATTACCTTAATTTTTAA

Protein sequence :
MATIKKYQDKDGNTRYQFQVYLGVDPLTGKKKNTRRRGFKTKKEAQIVLSRLELDIYNHGLPTKNDNTIFKDIYQLWFTQ
YKQTVKESTWVTTQRLFRLHILPIFSDYRIAKISIKDCQKAINQWFNAGLVKYHTLMNYVAKVLDYAINIDLISENPAKR
VIVPVNKNDRSRKNLENYFDKAELQYFFECLNDDDNTPQANVFFRLAAFTGMRKSEMLCLEWSDIDFSNHTIRVNKTQSR
GDGARLLVQAPKTARSNRTVYLDPTTIKILQHWQVDQKEWLLRFGFNINQGNHYVFANENNEMFQPSKPRKWLEHTLTKY
DLKHVTVHAFRHTYATLAFEAHASIKSVQDQLGHSSYRTTLDIYTAVTAKQKNEATEKLANYLNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAPIG0469 YP_005733279.1 integrase Not tested SAPI-S0385 Protein 2e-66 41
SAOV_0414c YP_005735930.1 integrase Not tested SaPI1 Protein 2e-66 41
SAB0342c YP_415844.1 integrase Not tested SaPIbov Protein 2e-66 41
unnamed AAG29618.1 integrase-like protein Not tested SaPIbov Protein 1e-66 41