Gene Information

Name : Lp16_1962 (Lp16_1962)
Accession : YP_008121778.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Virulence
Product : prophage P2b protein 8, helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2083263 - 2084657 bp
Length : 1395 bp
Strand : -
Note : -

DNA sequence :
ATGGGCAAAGCAATGGATTTACCAGCAGAGACCCGAGAAGCGGCCAACAATGTTATCAAAATGCAACGTGACGCTGATTG
GCAGAACGATTTCAAGAAGAATTCTGACGATGGAATTAAAACACAGTCTCTTTACAATATCCGCTTAATTATGGAACATG
ACGAAATGTTGAAAGGGCTAGTTGTCTTTGACGAGTTCTCGGAACAAATTGTCAAAACACCACAAGCAGAAAATTCACTG
TTCAAAAAAGGTTTTTGGAATGATGGTGATGACACGTTATTGAGAAGTTATATTGAGGATCATTACAACTTGTTATTCAG
CAAGGAAAACATTACCGACGCGGTAGTTACAGAGGCACGCCGCAAGACAATCAATCCGGTTAAGGCTCGTATTGAAGCGG
TAGAATGGGACGGCCAGCCACGTGCTGAACGTTATTTCATTGATTACTTAGGTGCCGAAGATAATCATTATACCCGCACC
ATCACTAAGAAATGGCTAACTGGTCTTATTGCCCGGGCCTATGTTCCCGGAGTTAAGTTTGAAATTGTTCCTATCTTAGA
GGGAAGCCAAGGACTTGGCAAGAGTACGGCTGGTAAGAATCTATACCCGGATAAATTCAATGATTCGTTGAAAGGAATGG
GTAAGCAGAAAGACGATTATCAACAGTTACAAGGTAGTTGGATTATTGAAGTTGCCGAGCTTTCCGCCATGAAGAAGACG
GATATTGAGGGAATCAAAAATTTCATTAGTGCACAATCCGACACATACCGGAATAGTTACGGCCGCTATGCGTTACCGCA
CCCACGTAAATGCGTATTTATTGGCACAACTAACCAAACCGACTATTTAAAGGACGCGACCGGTGAACGGCGCTTTTATC
CAATTAAATGTGGGGTCAACAAGGCCAAATTAGATGTATGGCACCCGGACGAGAATTACATGCTTCAAGTATTGGCGGAA
GCCATGTACTGGTTTAGGAATGGCGAACCACTATATCTGGATCAGGCCACTATGAAAGAGGCTAAGGCGTATCAGATGGC
TGCGGAAACTGTCGACCCTATGCGAGATGCCATCGAAGCGTTTTTAGCAATGGAAGTTCCCACAGATTGGGAAAATATGA
GTACCGGCTTAAAACAAAGCTATGTCAGTGACTACGGCCATCATTCTAAGTGGCTAAAAGATCAAGTCAGTAATGAACGG
AAACTACTCAACCAAACAACAACTCTGGAAATCATGGAAGTTGTCTTCCATAAAACAGTCGATCGTTTTTTAACCGGGCG
AACAAACTCGGAAGCTAAGCGAATCAAGCTATTAATGGACAATATGGACGGCTGGGAAGCTAAAAGAATTAGAATTAATG
GCAAGCAACCGCACGGATATGTCCGCGTACAATGA

Protein sequence :
MGKAMDLPAETREAANNVIKMQRDADWQNDFKKNSDDGIKTQSLYNIRLIMEHDEMLKGLVVFDEFSEQIVKTPQAENSL
FKKGFWNDGDDTLLRSYIEDHYNLLFSKENITDAVVTEARRKTINPVKARIEAVEWDGQPRAERYFIDYLGAEDNHYTRT
ITKKWLTGLIARAYVPGVKFEIVPILEGSQGLGKSTAGKNLYPDKFNDSLKGMGKQKDDYQQLQGSWIIEVAELSAMKKT
DIEGIKNFISAQSDTYRNSYGRYALPHPRKCVFIGTTNQTDYLKDATGERRFYPIKCGVNKAKLDVWHPDENYMLQVLAE
AMYWFRNGEPLYLDQATMKEAKAYQMAAETVDPMRDAIEAFLAMEVPTDWENMSTGLKQSYVSDYGHHSKWLKDQVSNER
KLLNQTTTLEIMEVVFHKTVDRFLTGRTNSEAKRIKLLMDNMDGWEAKRIRINGKQPHGYVRVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virE YP_006376742.1 virulence-associated E family protein Virulence Not named Protein 4e-85 43
unnamed AAL04136.1 unknown Not tested SaPI3 Protein 4e-54 41
unnamed AAL67615.1 - Not tested SaPI1 Protein 9e-54 41
SACOL0897 YP_185768.1 hypothetical protein Not tested vSa1 Protein 5e-54 41
SAV0791 NP_371315.1 hypothetical protein Not tested vSa3 Protein 7e-54 41