Gene Information

Name : Lp16_0173 (Lp16_0173)
Accession : YP_008120019.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Unknown
Product : raffinose-6-phosphate hydrolase & stachyose-6-phosphate hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 184903 - 186579 bp
Length : 1677 bp
Strand : +
Note : -

DNA sequence :
ATGGCAGCAACAATCAAGTGGTGGCAACAAGCCGTTGTCTATCAGGTCTATCCACGGAGTTTTCAAGATACCAATCATGA
TGGTATTGGTGACTTAAAGGGGATCACGGCCCACCTAGACTACTTAAAGCAATTAGGAATCGACGTCATTTGGCTCAATC
CCATTTATCGTTCACCCAACGATGATAATGGTTATGATATTAGTGATTATCAACAAATTGCGGCCGACTTTGGCACTATG
GCTGATTTTGATGAATTATTGCAAGCCGCCCATGACCGGGGCTTAAAGATCATCATGGACTTGGTTGTTAACCATACCTC
TGATGAGCATCCATGGTTCAAACGCAGTCGCCAGGACCGCACCAATCAATATCGTGATTTCTACTTTTGGCGCTCAGGTA
ACGGCAAAAAGGCGCCCAATAATTGGGATGCGGCTTTTGGTGGTTCAGCATGGCAATATGATGAGCAGACCCAGCAGTAT
TATTTACACACGTTTTCAACAAAACAACCTGATTTAAACTGGGAGAATCCGACCTTACGAGAGTCAGTTTATACGATGAT
GACCTGGTGGCTGAACAAGGGTGTTGACGGTTTTCGAATGGACGTCATTAACCAAATCTCTAAGTTACCCGGGTTACCAA
ATGGTCCACTGAAACCGCACAGTCAGTTTGGCGATGCTCGAGTAACGAACGGACCGCGAGTTCATGAATTCTTGCAAGAA
ATGAACCAAGAAGTGTTGTCACAGTTTGATATCATGACGGTTGGTGAGACCCACGGGGTGACACCAGCGGATGCGCTGAA
GTATGCGGGCGCTGATCGGCACGAATTAGATATGGTCTTTGAATTTCAACATCTGCGACTTGATAATAGTCAGCATGGTC
TTGGTAAGTGGAGTACGCGTAAGACACCGTTAGTGGCGCTAAAGAAAGTCATTAGTGACTGGCAAGTCGGACTTGAAGGG
CGGGCTTGGAACAGCCTGTTTTGGAACAATCATGATACGCCACGAGCGGTCTCACGTTTTGGTGATGACCGACCAGCATA
TCGGGTACGTTCGGCTGAAATGCTCGCAACGTGTTTACACCTCTTGCAGGGAACCCCGTATATTTATCAAGGTGAAGAAC
TGGGGATGACTGACGCTCATTTTACTGAATTAACCAGTTACCGAGATATTGAATCGCTCAATGCCTATCGTGATTTAGTG
ACTGAGCGCCAACTACTATCACCGGCAGATATGATGGCCCGATTAGCGGCGCGTTCTCGGGACAACTCGCGAACGCCGAT
GCAATGGGACACGGAGGTTAACGCGGGTTTTAGTGACGCGGCGCCATGGCTCACGGTCAATCCCAACTATCGTCAAATCA
ATGCTGCCGCAGCTTTGGCTGATCTGGATTCAGTGTGGTACTATTACCAGCACTTGATTCAATTACGACATCAATACCCC
TTAGTGACGTTAGGTTCGTTTGAGCTCTTGTGGGCCGATGATCCGCAGGTATTCTTATATGAACGGCAATGGGAAGGGCG
GACCTGGCTAGTTTGTTGCAATTTCACAGCCGAGACACTGTCCCGACCACTGGATCAATATCTGACGCCCACGGCCAAAT
GCTTGATTAGTAATTATGGCGAGCAGCAGCCAAATAAATTACGGCCTTATGAGGCTTGGGTCTACCGACTCGCATAG

Protein sequence :
MAATIKWWQQAVVYQVYPRSFQDTNHDGIGDLKGITAHLDYLKQLGIDVIWLNPIYRSPNDDNGYDISDYQQIAADFGTM
ADFDELLQAAHDRGLKIIMDLVVNHTSDEHPWFKRSRQDRTNQYRDFYFWRSGNGKKAPNNWDAAFGGSAWQYDEQTQQY
YLHTFSTKQPDLNWENPTLRESVYTMMTWWLNKGVDGFRMDVINQISKLPGLPNGPLKPHSQFGDARVTNGPRVHEFLQE
MNQEVLSQFDIMTVGETHGVTPADALKYAGADRHELDMVFEFQHLRLDNSQHGLGKWSTRKTPLVALKKVISDWQVGLEG
RAWNSLFWNNHDTPRAVSRFGDDRPAYRVRSAEMLATCLHLLQGTPYIYQGEELGMTDAHFTELTSYRDIESLNAYRDLV
TERQLLSPADMMARLAARSRDNSRTPMQWDTEVNAGFSDAAPWLTVNPNYRQINAAAALADLDSVWYYYQHLIQLRHQYP
LVTLGSFELLWADDPQVFLYERQWEGRTWLVCCNFTAETLSRPLDQYLTPTAKCLISNYGEQQPNKLRPYEAWVYRLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 6e-152 56