Gene Information

Name : Lp16_1465 (Lp16_1465)
Accession : YP_008121292.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Unknown
Product : integrase/recombinase, XerC/CodV family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1578396 - 1579313 bp
Length : 918 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAAGCCGACGATTGATCAAAAAATGCAGGACCAGCTTGCTGATTACCTGCATTTTTTGCGTGTTGAACGGGGGTT
AGTTGAGAATACGATTAAGAGTTATTCTCAGGACCTGACTACGTTTAGCGAATACTTGATGAGTCAGCAAATCACGGACT
ATCGGGTGGTTGATCGGTACGTCCTATTGAATTATTTACAGTATCTAGATGAGGCTGGTAAATCGCGAAATACAATCATT
CACAGTGTTTCTAGTTTACGTAAGTTTTTTCAATATTTAGCACAGATGCACGCTATCGATACTGATCCGATGCTAAAAAT
CGACACGCCTAAGCGGGCGCAGCATTTACCGCAAGTATTGTCACCACGCGAGGTCGAACGGTTGCTAGCGGTGCCTAAGT
TGAATACCCCGTTAGGATTACGAGACCGAACTCTGTTAGAAGTGATGTATGCGACCGGTCTGCGAGTCAGCGAGACAATT
AATTTAACGATGGATGATCTGCACTTAGACTTGGGATTGATTCAAACAATCGGTAAGGGTGATAAAGAGCGGATTATTCC
TATCGGTGATGTTGCCATTGATTTTATTACCCGTTATTTAAAAACGGCTCGGCCCAAACTCGTCTCTGCCAAACGCCGGA
ATAGCTATTTGTTTATTAATAATCACGGTGGTAAATTAAGTCGGCAAGGGGTTTGGAAAAATCTGAAGGCAGAAGTCAAG
GCGGCTGGCATCGAAAAAAACGTGACGCCGCATACGTTGCGCCACTCGTTTGCGACTCACATCTTAGAAAATGGTGCGGA
CTTGCGTGTCGTTCAGGAGCTTTTAGGGCATGCCGATATTTCGACGACTCAAATTTATACGCATATTTCGAAAAAACGCC
TAGCTGAGGTTTATAATAAATATCATCCGCGGGCATAG

Protein sequence :
MSKPTIDQKMQDQLADYLHFLRVERGLVENTIKSYSQDLTTFSEYLMSQQITDYRVVDRYVLLNYLQYLDEAGKSRNTII
HSVSSLRKFFQYLAQMHAIDTDPMLKIDTPKRAQHLPQVLSPREVERLLAVPKLNTPLGLRDRTLLEVMYATGLRVSETI
NLTMDDLHLDLGLIQTIGKGDKERIIPIGDVAIDFITRYLKTARPKLVSAKRRNSYLFINNHGGKLSRQGVWKNLKAEVK
AAGIEKNVTPHTLRHSFATHILENGADLRVVQELLGHADISTTQIYTHISKKRLAEVYNKYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-53 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-53 41