Gene Information

Name : Lp16_1245 (Lp16_1245)
Accession : YP_008121075.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1352047 - 1354086 bp
Length : 2040 bp
Strand : +
Note : -

DNA sequence :
ATGGGACAACAGTTGAGTGACGCGGTTGCAACTTTAAGTGGTGTCGGCCCAGCCCGCCAAAAAGGTTTAGCGGAGCTTGG
GATTAATACGATTGCAGATCTATTGACCTATTATCCCTTTCGCTATGAAGATCTACAGGTCAAAGACGTCAATGAAATCG
CCGATCAAGAAAAGGTGACACTAAAGGGTACTGTGGCTTCTGAACCTGTGCTAGCACGGTTTGGCCGTAAGAAGAATCGC
CTGAATTTTCGCTTGTTAATCGACCATGACGTCTATATGGTGACTTTTTTTAATCAACCATACTTGATGAAACAGATTGA
GACTGGCCAAGATTTAGCCGTTTATGGCAAGTGGGACGCCACGCGCAGTAGCTTGACGGGAATGAAGATCATCAATCCCA
ATAATGCGGATTCAGCGTTTGGTTCGATTTATCCGGCCAGCAAGACGGTCAAGCAGGGGACGATTCAGAAGATGATCAAA
CAAGCATATGAGTTATATGCCCCAGTCATTACGGACATTGTGCCTGCTAACTTACGTGCTAAATACCGACTGTTACCGCG
GCGCCAAATGATTCATGATATGCACTTCCCAGCTAGTCAAGCCGATTCAACGGCCGCTCGACGCTCAGCGACCTACGAGG
AGTTCTTGTTGTTTCAAATGCAAATGCAAGTTCTGAAGCAAACGGACGCGACGACGAACGGTATTGCGATCGCTTATGAC
AATGACCGACTAAAGGCGTTTATTAAAACACTGCCATTTGAATTGACCCACGCCCAAAAACGTGTCGTCAATGAAATTTG
TTTGGATTTGAAGTCACCGAAGCATATGAATCGGTTGCTTCAAGGTGACGTGGGGTCCGGGAAAACGATTGTGGCTGCCA
TTGTCATGTATGCGGCGATTACCGCTGGTTATCAGGCCGCGTTGATGGCGCCAACCGAAATTTTGGCTGAACAACACGCA
AATAACTTGGCCCAGGTCTTTGCCGACACGGATGTCAACGTTGCGCTGTTAACGGGTGCGACCAAGCCAGCTGCCCGCAA
GACATTGTTAGCAGCGCTGGCTGCTGGTGAGATCAACTTATTGATTGGCACGCACGCCCTGATCCAGGACGGGGTGACTT
ATGCTAATTTGGGATTAGTTATTACCGATGAGCAACATCGCTTTGGGGTTAACCAACGGGCCGCCTTTCGTCAAAAAGGC
GGGCAACCTGATGCACTAGCCATGACGGCAACACCAATTCCAAGGACATTGGCGATTACGGCGTATGGTGAAATGGACGT
TTCTGAAATTGATGAATTACCGGCTGGTCGGCAACCGATTCAAACCACTTGGGTACGGAGCAACCAAGCTAATTCGGCGC
TAAGCTTTGTTCATCAACAGATTGACAATGGATCGCAAGCCTATGTGGTGACACCATTGATTGAGGAATCCGAGACGCTG
GATGTTAAAAACGCCGAGGCTCTGTCAGCTAATTTACAAGAGTATTTTGGGGCGAGTGTTAAAGTTGGACTGTTGCACGG
TCGAATGAAACCTGAGGAAAAAGACGCGGTCATGGCGGCTTTTAAGGCGGGAGACATTCAGTTACTTGTTTCCACGACCG
TGATTGAAGTGGGTGTTGACGTCAAGAATGCCACAATCATGATGATTTATGATGCTGACCGTTTTGGCTTGGCGCAACTA
CATCAATTACGCGGACGCGTCGGTCGTGGGACCAAGGCTTCATACTGTATTTTGGTGGCTGATCCCAAGAACCAGCAAGG
GATTGAGCGGATGCAGATCATGACGCAGACAACAAATGGTTTTGTTTTGGCACAAAAAGACTTAGAATTACGAGGAGCCG
GTGATGTGCTGGGGGTCAAGCAATCGGGAATGCCGGAATTTAAAGTGGGTGATCCGATTGCGGATTTGACCGTGCTACAA
GTTGCCCAGCAAGATGCCCACGCAATCGTGCAGCAACCGGATTGGCAAAGTCAACCGGATAATCGGGCACTAGCCGCCTA
TTTGAGCCAGAAGTTGGCTGCGGTGGGGACGCTCGATTAA

Protein sequence :
MGQQLSDAVATLSGVGPARQKGLAELGINTIADLLTYYPFRYEDLQVKDVNEIADQEKVTLKGTVASEPVLARFGRKKNR
LNFRLLIDHDVYMVTFFNQPYLMKQIETGQDLAVYGKWDATRSSLTGMKIINPNNADSAFGSIYPASKTVKQGTIQKMIK
QAYELYAPVITDIVPANLRAKYRLLPRRQMIHDMHFPASQADSTAARRSATYEEFLLFQMQMQVLKQTDATTNGIAIAYD
NDRLKAFIKTLPFELTHAQKRVVNEICLDLKSPKHMNRLLQGDVGSGKTIVAAIVMYAAITAGYQAALMAPTEILAEQHA
NNLAQVFADTDVNVALLTGATKPAARKTLLAALAAGEINLLIGTHALIQDGVTYANLGLVITDEQHRFGVNQRAAFRQKG
GQPDALAMTATPIPRTLAITAYGEMDVSEIDELPAGRQPIQTTWVRSNQANSALSFVHQQIDNGSQAYVVTPLIEESETL
DVKNAEALSANLQEYFGASVKVGLLHGRMKPEEKDAVMAAFKAGDIQLLVSTTVIEVGVDVKNATIMMIYDADRFGLAQL
HQLRGRVGRGTKASYCILVADPKNQQGIERMQIMTQTTNGFVLAQKDLELRGAGDVLGVKQSGMPEFKVGDPIADLTVLQ
VAQQDAHAIVQQPDWQSQPDNRALAAYLSQKLAAVGTLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-93 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lp16_1245 YP_008121075.1 ATP-dependent DNA helicase RecG BAC0356 Protein 2e-101 42