Gene Information

Name : Lp16_1139 (Lp16_1139)
Accession : YP_008120969.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Unknown
Product : DNA-directed DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1249864 - 1252512 bp
Length : 2649 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAAAAATTATTACTGATTGATGGTAACAGTGTGGCATTTCGGGCGTTCTTTGCGTTGCATAGTCAACTGGAACG
GTTCGTAAATCCAGACGGCCTGCATACCAACGCCATTTATGGCTTCAATACAATGCTTGACCACATGATCAAGGCAGTCG
AACCCACGGATATGTTAGTGGCTTTTGATGCGGGTAAGACCACGTTTCGAACAGCCATGTACGATAATTACAAGGGTGGC
CGGGCTAAGACGCCTAGTGAGTTTTCTGAACAAATGCCGTATATCAAACAGCTATTAGACGCGTATGGTATCAAACATTA
TGAATTAAAAGACTACGAAGCCGATGACATTATTGGCACACTGGCCGGTCAAGCGGATCAAACCGGCTACACCACGACGG
TCGTCACTGGTGACCGTGATTTGACGCAGTTGACGACCGAGCATACCACGGTGGCCGTGACCGTTAAAGGTGTTTCTGAA
GTGGAACACTATACGCCGGCGCACGTTGAAGAAAAGCTGGGCATCACACCGGCACAAATTATTGACATGAAGGGGTTGAC
AGGTGATACCTCGGATAACTATCCGGGTGTCACCAAGGTTGGTGAGAAGACCGCCCTTAAATTACTCAAACAGTATGGTA
CGATGGAAGGCATTTATGAAAACATCGATGCCATGAAGCAGAGCAAGATGAAGGAACATCTGATTGAGGATCGCGAACAA
GCGGCGCAGGCTAAGGTGCTAGCAACAATCAAGCGGGATGCGCCGATTGATGTTCAATTGGCTGATTTATCCTATGATGG
CCCGGATCTTGACCAGCTGGCCGCGTTTTATCAGAAGATGGACTTTCAATCATTTTTGAAGAAATTACACCTACAGTCGG
ACGAACCAGCAACGCCCATTGATTATACCGTCTTGACGAAAGCTAACCTGACGGAATTGCAACAATTTACCGATCACGTG
GACTTTTATTTGGAGATGCCAACGCCGAACTACCACACGTCGGCCTTTGCTGGCTTTGCCATCGGAGCGGATGATCACTG
GTACATCAGTCGGGATGTGGAATTATTAATGCAACCGACTGTGGCTGATCTCTTGAGTAGCACAACGATTACCAAGGACG
TTTTTGATATGAAACGCACGACGGTCGGGCTTAATCGTTTGGGTATTCAGCTAGGTAAAGTCGATTTTGATCTCTTACTC
GTTTCATACTTATTAGATACAAATGATAACAGTAACGACTTGGGAAGTTTAGCTGAGCAACACGGGTACACTGACTTGCC
GAGTGACGAGACCGTTTATGGTAAGGGCGTTAAGCGTGCCATTCCTGAAGATGATGATGTCTACTTTAGTCATCTCGCCC
GGAAATTGGCCGCGATCGCTAGTTTGAAGCCACAGTTATTAAAGGAATTGGCAGCCAATGAGCAGGATCAACTTTACGAT
GATATTGAAAAACCGATGGCCAATGTCTTAGCTCAGATGGAAATCGCCGGCATTACGGTCGACAGCAGTCGACTTAAAGC
CATGGGCAGTCAGTTTACAGAACGGTTGAGTGAAATTGAACAGACGATTTATCAAGAAGCCGGTGAAGAGTTCAATATTA
ATTCACCTAAGCAACTAGGTCACATCTTGTTTGAAGAAATGAAATTACCCGTAATCAAGAAGACCAAGACAGGGTATTCT
ACCGCCGTAGACGTTCTAGAAAAGTTAGCACCGGAAGCACCAATCGTCGCTAATATTTTACAATATCGTCAGATTTCGAA
GATTCAATCGACCTACGTTGTCGGTTTGTTAGATGCCATTCATTCTGCTGATCAAAAAGTGCATACGCGCTACTTGCAAA
CGTTGACCCAAACCGGCCGGTTGTCGTCCGTTGATCCAAACTTACAAAACATTCCGGTGCGCTTGGAAGAAGGACGTAAG
ATTCGACAAGCCTTTGTTCCTAGTCATGAAGGTTGGCAGATTTTCTCGTCTGATTATTCGCAAATCGAATTACGGGTTCT
CGCGCATATTACTGATGATGAAAATATGCAGGCCGCTTTTAAAGCGGGTGATGATATTCATGCCGCAACGGCCATGCGAA
TCTTTCATTTGAACTCAGCTGAAGAGGTGACGCCAAATATTCGACGGCAAGCCAAGGCGGTTAACTTTGGAATCGTCTAT
GGAATTAGTGATTACGGCTTGTCACAAAATATCGGCATTACGCGTAAACAGGCTCGCAGCTTTATTGACGCTTACTTCAA
AGAATATCCGGGTGTCAAAAAGTATATGGATGAAATTGTCCAAACGGCGAAAAAACAAGGTTATGTGGAAACCATTTCAC
ATCGACGCCGGTACTTGCCAGATATTAATTCCAAGAGCTTCAACCAACGCTCATTCGCTGAACGGACAGCCATGAATACC
CCCATCCAAGGGAGTGCGGCTGATATTATCAAGATTGCGATGATTAAGATGCAAGATAAGTTACAGGCTGCGGGTTTGAA
AGCAACCATGCTGTTACAAGTTCATGATGAATTGATTTTTGAAGCGCCAAAAGAAGAAATTCCAGTTTTAGAAAAATTAG
TGCCAAGCGTGATGGATTCCGCCGTACAGTTAGCCGTACCGTTAAAGGTTGAGAGCCACTACGGTGATACTTGGTACGAT
GCAAAATAG

Protein sequence :
MAKKLLLIDGNSVAFRAFFALHSQLERFVNPDGLHTNAIYGFNTMLDHMIKAVEPTDMLVAFDAGKTTFRTAMYDNYKGG
RAKTPSEFSEQMPYIKQLLDAYGIKHYELKDYEADDIIGTLAGQADQTGYTTTVVTGDRDLTQLTTEHTTVAVTVKGVSE
VEHYTPAHVEEKLGITPAQIIDMKGLTGDTSDNYPGVTKVGEKTALKLLKQYGTMEGIYENIDAMKQSKMKEHLIEDREQ
AAQAKVLATIKRDAPIDVQLADLSYDGPDLDQLAAFYQKMDFQSFLKKLHLQSDEPATPIDYTVLTKANLTELQQFTDHV
DFYLEMPTPNYHTSAFAGFAIGADDHWYISRDVELLMQPTVADLLSSTTITKDVFDMKRTTVGLNRLGIQLGKVDFDLLL
VSYLLDTNDNSNDLGSLAEQHGYTDLPSDETVYGKGVKRAIPEDDDVYFSHLARKLAAIASLKPQLLKELAANEQDQLYD
DIEKPMANVLAQMEIAGITVDSSRLKAMGSQFTERLSEIEQTIYQEAGEEFNINSPKQLGHILFEEMKLPVIKKTKTGYS
TAVDVLEKLAPEAPIVANILQYRQISKIQSTYVVGLLDAIHSADQKVHTRYLQTLTQTGRLSSVDPNLQNIPVRLEEGRK
IRQAFVPSHEGWQIFSSDYSQIELRVLAHITDDENMQAAFKAGDDIHAATAMRIFHLNSAEEVTPNIRRQAKAVNFGIVY
GISDYGLSQNIGITRKQARSFIDAYFKEYPGVKKYMDEIVQTAKKQGYVETISHRRRYLPDINSKSFNQRSFAERTAMNT
PIQGSAADIIKIAMIKMQDKLQAAGLKATMLLQVHDELIFEAPKEEIPVLEKLVPSVMDSAVQLAVPLKVESHYGDTWYD
AK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 58