Gene Information

Name : PCA10_p0630 (PCA10_p0630)
Accession : YP_008116550.1
Strain :
Genome accession: NC_021506
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 54929 - 56437 bp
Length : 1509 bp
Strand : +
Note : -

DNA sequence :
ATGACCTGCGCGACTGACTGCCTCCCTGACGACATCCAGGCCTTGAAAGCCTTGGTAACCGCCCAGCGCGGGGAAATCGA
GCACCTGAAACTGATGATCGCCAAGCTGCGGCGCACGCAGTTTGGTCGGCGTTCTGAGCAACTCGATGGCATGCTCGACC
AACTGCAACTGACGCTCGAGGAGTTGCAGGTCAGCGAGGCCGCACTGGCCTCGCCACCACCAGCCGAATCGCATCCACGT
CCCCCTGTACGACGCAAGCCATTGCCCGCGCACTTGCCGCGTGAAATCCACGTCCATCGACCCGATACGCAGTGTCCTGG
CTGTGGCGGCGAACTTCGCCATTTGGGTGATGACGTGGCTGAAGTTCTGGAGTACGTGCCGGCACGGTTCAAGGTGGTTC
GCCATGTGCGGCCCAAGTTGGCTTGCCGCTGCTGTGACGGGATTGTGCAGGTTCCTGCCCCTAGCCGCCCGATTGCCCGG
GGGCTTGCCGGGCCAGGATTGTTGGCCCATGTGCTGGTGTCCAAATACGTGGATCATCTGCCGCTGTATCGGCAGTCCGA
AATCTATGCGCGCGAGGGCGTGTCCCTGGAGCGCTCGACCATGGCCGACTGGGTCGGCGAAGCGAGCCGGCTCTTGCAGC
CATTGGTCGGCCGGTTGCGGCAGCACGTCATGACCAGCAACAAAGTCCACGCCGACGATACGCCGATCGCCGTGCTCGCC
CCCGGCCAGGGTAAAACCAAGACCGGACGCTTGTGGACGTATGTGCGTGACGAGCGCCCCACAGGTAGTAGCACACCTGC
GGCGGTCTGGTTTGCCTACTCGCCGGATCGCAAAGGCGAGCACCCCCGAGCCCATCTCAAAGGCTTCGCCGGGACATTAC
AAGCCGATGGTTATGCCGGTTTCGCTCAACTCTATGCCGCGGGCACGATTCACGAGGCGGCTTGTTGGGCGCATGCCCGG
CGCAAGTTTTTCGACCTGCACAAGGCATTGGCCTCACCGATCGCCGCTGAAGCCTTGCAGCGGATTGGTGCGCTATACGC
CATTGAGGCGGAAATTCGTGGACAACCGCCCGATCAACGACGCGCAGTGCGGCAGCGGCGAGCCAGCCCGCTGCTAGCGC
AATTTCACGCCTGGCTTAACCACACGCTGACGCAACTGCCGTCCAAATCGGCGCTGAGCGGTGCGATCTACTATGCCCTC
GCACGTTGGCAGGCGCTGACGCGCTACTGCACGGATGGCCGCATTGAGATCGACAACAACGCCGCCGAACGCGCCCTGCG
TACAGTCGCGCTGGGTCGCAAGAATTATCTGTTCGTCGGTTCCGACGCCGGCGGAGAAAGAGCGGCGGCGATCTATAGCC
TGGTCGGTTCAGCCAAGCTCAACGCATTGAACCCACAGGCTTATTTGACGCACGTGCTGGAGCGCATCGCCGACTATCCA
ATCAATCAGCTCGACGATTTGCTGCCCTGGAATATTGCTCTGCCTACCTTAGAACATGAGGCCGCTTGA

Protein sequence :
MTCATDCLPDDIQALKALVTAQRGEIEHLKLMIAKLRRTQFGRRSEQLDGMLDQLQLTLEELQVSEAALASPPPAESHPR
PPVRRKPLPAHLPREIHVHRPDTQCPGCGGELRHLGDDVAEVLEYVPARFKVVRHVRPKLACRCCDGIVQVPAPSRPIAR
GLAGPGLLAHVLVSKYVDHLPLYRQSEIYAREGVSLERSTMADWVGEASRLLQPLVGRLRQHVMTSNKVHADDTPIAVLA
PGQGKTKTGRLWTYVRDERPTGSSTPAAVWFAYSPDRKGEHPRAHLKGFAGTLQADGYAGFAQLYAAGTIHEAACWAHAR
RKFFDLHKALASPIAAEALQRIGALYAIEAEIRGQPPDQRRAVRQRRASPLLAQFHAWLNHTLTQLPSKSALSGAIYYAL
ARWQALTRYCTDGRIEIDNNAAERALRTVALGRKNYLFVGSDAGGERAAAIYSLVGSAKLNALNPQAYLTHVLERIADYP
INQLDDLLPWNIALPTLEHEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-110 61
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-121 59
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-136 57
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-95 57
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-113 55
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-125 54
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 3e-125 54
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 3e-125 54
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-125 54
tnp AEA34686.1 transposase Not tested Not named Protein 3e-125 54
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-125 54
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-124 54
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-125 54
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-124 54
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 1e-124 54
unnamed AAL57570.1 unknown Not tested LEE Protein 3e-125 54
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-116 52
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 3e-115 52
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 3e-115 52
unnamed AAL08460.1 unknown Not tested SRL Protein 2e-91 51
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 2e-81 51
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 4e-102 47
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 6e-102 46
EXB16 ABD94703.1 ISPpu14 transposase Orf3 Not tested ExoU island B Protein 2e-72 44
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 4e-79 44
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 2e-87 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCA10_p0630 YP_008116550.1 putative transposase VFG1700 Protein 3e-110 61
PCA10_p0630 YP_008116550.1 putative transposase VFG1513 Protein 6e-96 57
PCA10_p0630 YP_008116550.1 putative transposase VFG0793 Protein 1e-125 54
PCA10_p0630 YP_008116550.1 putative transposase VFG1051 Protein 1e-91 51
PCA10_p0630 YP_008116550.1 putative transposase VFG1736 Protein 5e-91 51