Gene Information

Name : PCA10_p0550 (PCA10_p0550)
Accession : YP_008116542.1
Strain :
Genome accession: NC_021506
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 47570 - 49249 bp
Length : 1680 bp
Strand : -
Note : -

DNA sequence :
ATGGCGGCGCAGCGAGTAGCCATGCGTAATATCAAAGAATGTCTGCGCCTCAAGTTCGAGGGCGGCCTCTCTCACGAGAA
GATCGCCCGGGCCTTGCAGCTGTCCAAGGGCGTCGTCAGTAAGTACGTCACCGCAGCCGCTGAAACCGGGATGGAGTGGC
CGGCGCTGGCCGTGCTGGATGAGGTGGCGCTGGCGGCGGCACTGTTGCCCACTGCCAGGGTTCGCCAGACCCGCGGCGAG
CGGGTGCTGCCGGATCTGATCACGATCCACCGCGAATTGCGGCGCAAGGGCGTCACCCTGCAACTGCTGTGGGAGGAGTA
CGTCGCCGCCCATCCCGAGCAGCCGACCTACCGCTATACCCAGTTCGTCGAGCACTACCGCCGCTACGCCAGCACCCTCA
AACGCTCGATGCGTCAACAGCACCGGGCCGGCGAGAAGCTGTTCATCGACTACGCCGGCCCGACGCTGCCGGTGATCGAC
CCGGCCACCGGCGAGATCAGCCGGGCGCATATCTTCGTCGCAGCGCTGGGGGCCTCGAACTACACCTATGCCTGCGCCAC
GCCGGGGGAAACCCAGGTGGACTGGCTGACCGCGCTGGGTCAGGCATTCAGCTATTTTGGCGGGGTCAGCGAGATGGTGG
TGCCGGACAACCCGCGCGCCCTGATCGCCCATCCCGACCGCTACGAGCCGGGCTTGAACCGCGCCGCGCTGGAGTGCGCC
CGGCATTACGACACGGTGATGCTGCCGGCGCGGCCGCGTAAGCCGCAGGATAAAGCCAAGGCCGAGGTGGCGGTACAGGT
CGTCGAACGCTGGATCATGGCGCGGCTGCGCCACCAGCAGTTCTTCAGCCTGCACGCGCTCAACCAGGCGATTGCCAAGC
TGCTGGAGGACTTGAACCAGCGCCCGTTCAAGAAGCTCGATGGCTGCCGCCGGGAGTGGTTCGAGCGGCTCGATCAACCG
GTGCTGCGGCCGCTGCCACAGCATCCCTACGAGGTGGTGACCTTCAAGCGCTGCAAGGTCAACATCGACTACCACATCGA
AGTGAACGGCGGCTTCTACAGCGTACCCTCGGCCCTGGCCCGGCAGAGCGTCGATGTGCGGCTGAGCGCGCATACCGTGG
AAGTCCTGCACGGCAACCGGCGGGTCGCCAGCCACTTGCGACTTCAGCGGCGCGGCGCCTACAGCACCCAGAGCGAACAC
ATGCCGGCCTCGCACAAGGCGCACCGCGAGTGGACGCCGCAGCGCCTGCTCGACTGGGGTGAGCGAATCGGCCCGCAAAC
CCGGCAGATCGTCGAGCACCAACTGACCCACAAACCGCACCCGGAGATGGGCTATCGCGCCTGCCTGGGCCTGCTCTCGC
TGGCGCGCCAGTACGGTAACGCGCGCCTGGAGGCGGCGGCCAGCCGCGCCGTGCAACTGCGGGCGCTTAACGGCCGCACC
GTGCGCAACCTGCTCAAGCAAGGCCTCGACCAGCAACCACTGCCCAAGCCCGCGACGCCGGCAGCACAACCCAGCAGTCA
CGAGAACGTCCGTGGCGCCGATTACTACACCCAAGAGGAGCTGTTCGATGATGACCCAACACACCCTGAGCCAATTGCAC
CAACTGCGGCTGGGCGGCATGGCCCGAGCACTGGAAGAACAATGGACGCTGCCGGCCAGCCACAGCCTGAGCTTCGATGA

Protein sequence :
MAAQRVAMRNIKECLRLKFEGGLSHEKIARALQLSKGVVSKYVTAAAETGMEWPALAVLDEVALAAALLPTARVRQTRGE
RVLPDLITIHRELRRKGVTLQLLWEEYVAAHPEQPTYRYTQFVEHYRRYASTLKRSMRQQHRAGEKLFIDYAGPTLPVID
PATGEISRAHIFVAALGASNYTYACATPGETQVDWLTALGQAFSYFGGVSEMVVPDNPRALIAHPDRYEPGLNRAALECA
RHYDTVMLPARPRKPQDKAKAEVAVQVVERWIMARLRHQQFFSLHALNQAIAKLLEDLNQRPFKKLDGCRREWFERLDQP
VLRPLPQHPYEVVTFKRCKVNIDYHIEVNGGFYSVPSALARQSVDVRLSAHTVEVLHGNRRVASHLRLQRRGAYSTQSEH
MPASHKAHREWTPQRLLDWGERIGPQTRQIVEHQLTHKPHPEMGYRACLGLLSLARQYGNARLEAAASRAVQLRALNGRT
VRNLLKQGLDQQPLPKPATPAAQPSSHENVRGADYYTQEELFDDDPTHPEPIAPTAAGRHGPSTGRTMDAAGQPQPELR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 3e-100 47
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 3e-103 47
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 5e-103 47
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 2e-103 47