Gene Information

Name : tnpRa (PCA10_p0520)
Accession : YP_008116539.1
Strain :
Genome accession: NC_021506
Putative virulence/resistance : Virulence
Product : resolvase TnpRa
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 45011 - 45571 bp
Length : 561 bp
Strand : +
Note : -

DNA sequence :
TTGCAAGGACAACGCATCGGTTATGTCCGGGTCAGCAGCTACGACCAGAACCCGGAACGCCAACTGGAACAGACCGAGGT
GAACAAACTGTTCACCGACAAGGCCTCCGGCAAGGACACCCAACGTCCGCAACTGGAGGCTATGCTTGGCTTCGTCCGCG
AGGGTGATACCGTCGTGGTGCACAGCATGGATCGTTTGGCCCGCAACCTCGATGACCTGAGGCGTCTGGTGCAAAAGCTG
ACCCAGCGCGGCGTGCGTATCGAGTTCCTGAAGGAAGGCCTGGTGTTCACCGGCGAGGACTCGCCCATGGCCAACCTGAT
GCTGTCGGTCATGGGGGCCTTTGCCGAGTTCGAGCGTGCCCTCATCCGCGAGCGACAGCGTGAGGGTATCGCTCTGGCCA
AGCAACGCGGTGCTTACCGGGGCCGCAAGAAAGCCCTGTCTGATGAGCAGACAGTCGCAGTACGACAGCGTGCCGCTGCC
GGCGAGCAGAAAGCCCAGTTAGCCCGTGAGTTCGGTATAAGTCGGGAAACCCTCTACCAGTACCTACGCACGGATGACTA
A

Protein sequence :
MQGQRIGYVRVSSYDQNPERQLEQTEVNKLFTDKASGKDTQRPQLEAMLGFVREGDTVVVHSMDRLARNLDDLRRLVQKL
TQRGVRIEFLKEGLVFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQTVAVRQRAAA
GEQKAQLAREFGISRETLYQYLRTDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 9e-73 95
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 5e-63 82
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 6e-63 81
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 9e-63 81
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 6e-63 81
res YP_005124341.1 DNA-invertase Not tested Not named Protein 1e-24 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpRa YP_008116539.1 resolvase TnpRa VFG1030 Protein 2e-63 81