Gene Information

Name : tnpRb (PCA10_p2020)
Accession : YP_008116689.1
Strain :
Genome accession: NC_021506
Putative virulence/resistance : Virulence
Product : resolvase TnpRb
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 179489 - 180061 bp
Length : 573 bp
Strand : -
Note : -

DNA sequence :
TTGACCTCTGCTTGCCAAAGTCATAGATTTCAGCCTGACAAATTCAGCAGTTACGACCAGAACCCGGAACGCCAACTGGA
ACAGACCCAGGTGAGCAAGCTGTTCACCGACAAGGCCTCGGGCAAGGATAATCAGCGCCCGCAACTGGAGGCGTTGCTGA
GCTTCGTCCGTGAGGGCGACACCGTGGTGGTGCATAGCATGGATCGTCTGGCGCGCAACCTCGATGACCTGCGCCGCCTG
GTGCAGAAGCTGACCCAGCGCGGCGTGCGCATCGAGTTCCTGAAGGAGGGCTTGGTGTTCACGGGCGAGGACTCCCCGAT
GGCCAACCTGATGCTATCTGTGATGGGGGCCTTCGCTGAGTTCGAGCGCGCCTTGATCCGTGAGCGGCAGCGCGAGGGCA
TCGCCTTGGCCAAGCAGCGCGGCGCGTACCGAGGCCGCAAGAAAGCCCTGTCCGATGAGCAGGCTGCTACCCTGCGGCAG
CGAGCGACGGCCGGCGAGCCCAAGGCGCAGCTCGCCCGTGAATTCAACATCAGCCGGGAAACCCTCTACCAGTACCTCCG
CACGGACGACTGA

Protein sequence :
MTSACQSHRFQPDKFSSYDQNPERQLEQTQVSKLFTDKASGKDNQRPQLEALLSFVREGDTVVVHSMDRLARNLDDLRRL
VQKLTQRGVRIEFLKEGLVFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQAATLRQ
RATAGEPKAQLAREFNISRETLYQYLRTDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 7e-67 90
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 5e-57 81
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 3e-57 81
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 3e-57 81
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 6e-59 73
res YP_005124341.1 DNA-invertase Not tested Not named Protein 2e-19 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpRb YP_008116689.1 resolvase TnpRb VFG1030 Protein 1e-57 81