Gene Information

Name : tnpAb (PCA10_p2010)
Accession : YP_008116688.1
Strain :
Genome accession: NC_021506
Putative virulence/resistance : Unknown
Product : transposase TnpAb
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 176518 - 179328 bp
Length : 2811 bp
Strand : -
Note : -

DNA sequence :
GTGCAACTCTGCCTGCTGCGCTTCCCCGGCTATGCGTTGGGCACCGACAGCGAGTTGCCCGAGCCGGTCATCCAGTGGGT
GGCCAAGCAAGTTCAGGTCGACCCAACGAGTTGGGCGAAATACGGCGAACGCGACGTGACTCGCCGCGAGCACGCCCAGG
AACTGCGCACCTACCTACAACTGGCCCCGTTCGGCCTGTCCGACTTCCGCGCCCTGGTGCGCGAGCTGACCGAGTTGGCC
CAGCAGACCGACAAGGGGTTGCTGCTGGCCGGCCAGGCGCTGGAGAGTCTGCGGCAGAAGCGGCGCATCCTGCCGGCGCT
GAGCGTGATTGACCGGGCCTGCTCGGAAGCCATTGCGCGGGCCAATCGCCGGGTCTACCGCGCCCTGGTCGAACCACTCA
CGGACTCGCATCGGGCCAAGCTGGACGAGCTGTTGAAGCTCAAGGCCGGCAGCAGCATCACCTGGTTGACCTGGTTGCGG
CAGGCCCCACTAAAACCGAACTCCCGGCACATGCTCGAACACATCGAGCGGCTGAAGACATTTCAGCTGGTGGATTTGCC
CGAAGCTCTGGGCCGGCACATCCACCAGAACCGCCTGCTCAAGCTGGCCCGCGAGGGTGGGCAGATGACGCCCAAAGACC
TCGGTAAGTTCGAGCCGCAGCGGCGCTACGCGACCCTGGCCGCCGTGGTGCTGGAGAGTACGGCGACCGTGATTGATGAG
CTGGTCGATCTGCACGACCGCATCCTGGTCAAGCTGTTCAGCGGCGCGAAGCACAAGCATCAGCAGCAGTTCCAGAAGCA
AGGCAAGGCGATCAACGACAAGGTGCGCCTGTACTCCAAGATCGGCCAGGCCCTGCTGGAGGCCAAGGAAAGCGGCAGCG
ATCCCTACGCCGCCATCGAGGCGGTGATTCCCTGGGACGAGTTCACCGAGAGCGTCAGCGAGGCCGAGCTGCTGGCCCGG
CCGGAGGGCTTCGACCATCTGCACCTGGTTGGCGAGAACTTCGCCACCCTGCGCCGCTATACGCCGGCCTTGTTGGAGGT
GCTGGAACTGCGCGCCGCCCCGGCTGCGCAAGGCGTGCTGGCGGCCGTGCAGACCCTGCGCGAGATGAACGCCGACAACC
TGCGCAAGGTGCCGGCCGATGCGCCCACCGCCTTCATCAAGCCGCGCTGGAGGCCGCTAGTGATAACCCCGGAAGGCCTC
GACCGGCGCTTCTACGAAATCTGCGCCCTGTCAGAGCTGAAGAACGCGCTGCGCTCCGGCGACATCTGGGTCAAGGGCTC
GCGGCAGTTCCGCGACTTCGACGACTACCTGCTGCCGGCAGAGAGGTTCGCCGCGCTCAAGCATGCGCAGGCTCTGCCCC
TGGCGATCAACCCGAACAGCAACCAGTACCTGGAAGAACGCTTGCAGCTGCTGGACGAGCAGCTGGCCACCGTCACCCGC
CTGGCCAAGGACAACGAGCTGCCCGATGCCATCCTCACCGAGTCAGGGCTGAAGATCACCCCACTGGATTCCGCGGTGCC
CAATACCGCGCAGGCGCTGATCGACCAGACCAGCCAGTTGCTGCCGCGCATCAAGATCACCGAACTGCTGATGGACGTGG
ACGACTGGACGGGCTTCAGTCGCCACTTCACCCACCTGAAGGACGGTGCCGAGGCCAAAGACCGGACATTGCTGCTGTCA
GCGATCCTGGGCGATGCGATCAACCTCGGGCTGACCAAGATGGCCGAGTCGAGCCCCGGCCTGACCTACGCCAAGCTGTC
CTGGCTGCAAGCCTGGCACATCCGAGACGAAACCTACTCGGCGGCCCTAGCCGAGCTGGTCAACCACCAGTACCGTCATA
CCTTCGCCGCTCACTGGGGCGACGGCACGACCTCTTCTTCCGATGGCCAGCGCTTCCGGGCGGGCGGTCGGGGCGAAAGC
ACCGGGCACGTCAACCCGAAGTACGGCAGCGAGCCGGGGCGGCTGTTCTACACCCATATCTCCGACCAGTACGCACCGTT
CAGCACCCGCGTGGTGAATGTCGGCGTGCGCGATTCCACCTATGTGCTCGACGGCTTGCTGTACCACGAGTCCGACCTAC
GGATTGAGGAGCACTACACCGACACGGCTGGCTTCACCGATCACGTCTTCGCCTTGATGCACCTGCTGGGCTTCCGCTTC
GCACCGCGCATCCGCGACCTCGGCGAAACCAAGCTGTATGTTCCGAATAGCGTCCAGGACTACCCGACATTGCGCCCAAT
GGTTGGCGGTACCCTGAACATCAAGCATGTCCGCGCCCACTGGGACGACATCCTGCGCCTGGCCAGCTCGATCAAGCAGG
GCACCGTCACTGCCTCGCTGATGCTGCGCAAGCTCGGCAGCTACCCGCGCCAGAACGGTCTGGCCGTGGCCTTGCGCGAA
CTGGGCCGGATTGAGCGCACACTGTTCATCCTCGACTGGCTGCAAAGCGTAGAGCTACGTCGCCGCGTGCATGCCGGACT
GAACAAGGGCGAGGCGCGCAACTCCCTGGCCAGGGCGGTGTTCTTCAACCGCCTCGGCGAAATCAGGGATCGGAGCTTCG
AGCAGCAGCGCTACCGGGCCAGCGGTCTCAACCTGGTGACGGCCGCCATCGTGCTGTGGAACACGGTGTACTTGGAACGC
GCCACCCAGGCGATGGGCGAAGCGGGGAAGTCGGTGGATGGCGAGCTGCTGCAGTACCTGTCGCCGCTGGGGTGGGAGCA
CATCAACCTGACCGGCGATTATGTCTGGCGGCAGAGCCGCAGGCTGGAGGACGGGAAGTTTCGGCCGCTAAGGCTGCCCG
GAAAACCTTAG

Protein sequence :
MQLCLLRFPGYALGTDSELPEPVIQWVAKQVQVDPTSWAKYGERDVTRREHAQELRTYLQLAPFGLSDFRALVRELTELA
QQTDKGLLLAGQALESLRQKRRILPALSVIDRACSEAIARANRRVYRALVEPLTDSHRAKLDELLKLKAGSSITWLTWLR
QAPLKPNSRHMLEHIERLKTFQLVDLPEALGRHIHQNRLLKLAREGGQMTPKDLGKFEPQRRYATLAAVVLESTATVIDE
LVDLHDRILVKLFSGAKHKHQQQFQKQGKAINDKVRLYSKIGQALLEAKESGSDPYAAIEAVIPWDEFTESVSEAELLAR
PEGFDHLHLVGENFATLRRYTPALLEVLELRAAPAAQGVLAAVQTLREMNADNLRKVPADAPTAFIKPRWRPLVITPEGL
DRRFYEICALSELKNALRSGDIWVKGSRQFRDFDDYLLPAERFAALKHAQALPLAINPNSNQYLEERLQLLDEQLATVTR
LAKDNELPDAILTESGLKITPLDSAVPNTAQALIDQTSQLLPRIKITELLMDVDDWTGFSRHFTHLKDGAEAKDRTLLLS
AILGDAINLGLTKMAESSPGLTYAKLSWLQAWHIRDETYSAALAELVNHQYRHTFAAHWGDGTTSSSDGQRFRAGGRGES
TGHVNPKYGSEPGRLFYTHISDQYAPFSTRVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRF
APRIRDLGETKLYVPNSVQDYPTLRPMVGGTLNIKHVRAHWDDILRLASSIKQGTVTASLMLRKLGSYPRQNGLAVALRE
LGRIERTLFILDWLQSVELRRRVHAGLNKGEARNSLARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLER
ATQAMGEAGKSVDGELLQYLSPLGWEHINLTGDYVWRQSRRLEDGKFRPLRLPGKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 99
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 96
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 73
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 73
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpAb YP_008116688.1 transposase TnpAb VFG1031 Protein 0.0 72