Gene Information

Name : rph (PP4_53550)
Accession : YP_008116392.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 6057456 - 6058178 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence :
ATGAAACGTCCAAGTGGTCGCGCCGCCGATCAGCTCCGCTCGATCCGCATCACCCGCAACTACACCAAGCACGCCGAAGG
GTCGGTACTGGTCGAGTTCGGTGACACCAAGGTCATCTGCACGGTCAGCGTGGAAAACGGTGTCCCTCGTTTCCTCAAAG
GCCAGGGCCAAGGTTGGCTGACCGCCGAGTACGGCATGCTGCCGCGCTCCACCGGTGAGCGTAACCAGCGCGAAGCCAGC
CGTGGCAAGCAGGGTGGCCGCACCCTCGAAATCCAGCGCCTGATCGGCCGTTCGCTGCGCGCCGCGCTGGACATGAGCAA
GCTGGGTGACATCACCCTGTATGTCGACTGCGACGTGATCCAGGCCGATGGCGGCACCCGTACTGCGTCCATCACCGGCG
CCATGGTCGCCCTGTGCGACGCCTTGGCGGTGATCAAGAAGCGCGGCGGCCTGAAGGGCGGCAACCCGCTCAAGCACATG
ATTGCTGCCGTGTCGGTAGGCATGTACCAGGGCGAAGCCGTGCTCGACCTGGACTACCCGGAAGACTCCGCTGCCGAAAC
CGACCTGAACGTGGTGATGACCAGCGCCGGTGGCTTCATCGAAGTGCAGGGCACCGCCGAAGGTGCGCCGTTCCAGCCGG
AAGACTTCAACGCCATGCTCGCCCTGGCGCAGAAGGGCATGAACGATATCTTCGAGCTGCAGCAGGCTGCTCTGGCTGAC
TGA

Protein sequence :
MKRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREAS
RGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVIQADGGTRTASITGAMVALCDALAVIKKRGGLKGGNPLKHM
IAAVSVGMYQGEAVLDLDYPEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGMNDIFELQQAALAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-64 59