Gene Information

Name : PP4_53430 (PP4_53430)
Accession : YP_008116380.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6046233 - 6047726 bp
Length : 1494 bp
Strand : -
Note : -

DNA sequence :
ATGACTACCCTGACCCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGCGCCTTCATCAACGGCGA
ATACACCGATGCCGCATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCT
GCGACCTGGCCGATGCCAACCGCGCTGTGGAAAACGCCCGCGCCACCTTCAACGCTGGCGTGTGGTCGCAGCTGGCCCCG
GCCAAGCGCAAGGCCAAGCTGATCCGCTTCGCCGACCTGCTGCGCAAGAACGTTGAAGAGCTGGCGCTGCTTGAAACCCT
GGACATGGGCAAGCCGATTGGCGACTCCTCCAGCATCGACATCCCGGGTGCGGCGCAAGCCATTCACTGGACTGCCGAAG
CCATCGACAAGGTCTACGACGAAGTCGCCCCGACCCCGCATGACCAGCTTGGCCTGGTTACCCGCGAGCCGGTAGGTGTG
GTCGGTGCCATCGTACCGTGGAACTTCCCGCTGCTGATGGCCTGCTGGAAACTCGGCCCAGCGCTGGCTACCGGTAACTC
GGTGGTGCTCAAGCCGTCCGAAAAATCGCCGCTGACCGCCATCCGCATCGCCCAACTGGCGATCGAAGCCGGTATCCCGG
CTGGCGTGCTGAACGTGCTGCCAGGCTATGGCCACACCGTAGGCAAGGCCCTGGCCCTGCACATGGACGTCGACACCCTG
GTGTTCACAGGTTCGACCAAGATCGCCAAGCAGCTGATGGTGTACGCAGGCGAATCGAACATGAAGCGCATCTGGCTGGA
AGCCGGTGGCAAGAGCCCGAACATCGTCTTCGCCGACGCGCCGGACCTGCAAGCTGCTGCCGAAGCCGCTGCCAGCGCCA
TCGCCTTCAACCAGGGCGAAGTGTGCACCGCAGGCTCGCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCG
ATGGTGGTCGAGGCCCTGAAAGGCTGGAAGCCAGGCAACCCGCTGGACCCGCAGACCACTGTTGGTGCCCTGGTTGACAC
CCAGCAGATGAACACCGTGCTGTCGTACATCGAGGCTGGCCACAAGGACGGCGCCAAGCTGCTGGCCGGCGGCAAGCGCA
CCCTGGAAGAGACTGGCGGCACCTACGTCGAGCCGACCATCTTCGACGGCGTGACCAATGCCATGCGCATTGCCCAGGAA
GAAATCTTCGGCCCGGTGCTGTCGGTGATTGCCTTCGACACCGCCGAAGAGGCCATCGCCATTGCCAACGACACGCCATA
CGGCCTGGCCGCTGGCATCTGGACGTCGGACATTTCCAAGGCCCACAAGACCGCCCGTGCCGTGCGCGCTGGCAGCGTCT
GGGTCAACCAGTACGACGGCGGCGACATGACCGCACCGTTCGGTGGCTTCAAGCAGTCGGGCAACGGCCGTGACAAGTCG
CTGCATGCGCTGGAGAAATACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAA

Protein sequence :
MTTLTRADWEQRAQQLKIEGRAFINGEYTDAASGETFECLSPVDGRFLAKVASCDLADANRAVENARATFNAGVWSQLAP
AKRKAKLIRFADLLRKNVEELALLETLDMGKPIGDSSSIDIPGAAQAIHWTAEAIDKVYDEVAPTPHDQLGLVTREPVGV
VGAIVPWNFPLLMACWKLGPALATGNSVVLKPSEKSPLTAIRIAQLAIEAGIPAGVLNVLPGYGHTVGKALALHMDVDTL
VFTGSTKIAKQLMVYAGESNMKRIWLEAGGKSPNIVFADAPDLQAAAEAAASAIAFNQGEVCTAGSRLLVERSIKDKFLP
MVVEALKGWKPGNPLDPQTTVGALVDTQQMNTVLSYIEAGHKDGAKLLAGGKRTLEETGGTYVEPTIFDGVTNAMRIAQE
EIFGPVLSVIAFDTAEEAIAIANDTPYGLAAGIWTSDISKAHKTARAVRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS
LHALEKYTELKATWIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-132 59
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-75 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-76 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-76 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-76 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-68 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_53430 YP_008116380.1 aldehyde dehydrogenase VFG0082 Protein 5e-76 42