Gene Information

Name : katA (PP4_05140)
Accession : YP_008111551.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 589922 - 591361 bp
Length : 1440 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAAGATTCTTACCACCGCCAGCGGTGCACCAGTAGCCGACAACCAGAACTCCCGTTCCGCCGGCCCGCGTGGCCC
GCTGTTGCTCGACGACTTCCACCTGATCGAGAAGCTCGCACATTTCAACCGCGAGAACATTCCTGAGCGCCGCGTACACG
CCAAAGGCTCGGGCGCCTATGGCACCTTTACCGTCAACCGCGATATAACCCACTACACCAGCGCAAAGCTGTTTGAGCAG
ATCGGCAAGCAAACAGATACCTTCCTGCGGTTCTCCACTGTTGGCGGTGAACGTGGCTCTGCAGATACCGAGCGAGATCC
TCGTGGCTTTGCCGTCAAGTTCTACACCGAGGAAGGCAACTGGGACATCGTGGGTAACAACACGCCAGTGTTCTTCATTC
GCGACCCGCTGAAGTTTCCGGACTTTATCCACACCCAGAAGCGCCATCCGCAATCCAACCTGAAGAACGCCCAGATGATG
TGGGATTTCTGGTCGCACTCGCCCGAGGCGCTGCACCAGGTCACGATCCTGTTCTCGGACCGTGGTATTCCGGACGGCTA
TCGCCATATGCACGGCTTCGGCAGCCACACGTACAGCTTGATCAACGCCAAGGGCGAGCGTACCTGGGTCAAATGGCATT
TCAAGACCCAGCAAGGTATCAAGAACCTCGCGCCGGCAGATGCTGCACGCCTGGCGGGTACTGACCCGGACTACGCCCAG
CGCGACCTGTTCGAAGCCATTGAACGTGGCGACTACCCGCGTTGGACCGTATGCATTCAGGTCATGAGCGAAGCCGAGGC
AGCCAGCCGCGACGAGAACCCCTTCGACGTCACCAAGACCTGGTCGCAGAAGGATTATCCGTTGATAGAGGTGGGCGTGC
TGGAGCTCAACCGTAATCCGCTCAACTACTTCGCCGAAGTCGAGCAGGCTGCGTTCGGGCCGAGCAACATGGTGCCAGGG
GTTGGCCTGTCGCCGGACCGCATGCTGCAGGGCCGTGTATTCGCTTACGCAGACGCACACCGCTACCGTGTGGGCACCAA
CCACCAGCACTTGCCGGTGAATGCCCCACGCTGCGCAGTCAACAGCTACCAGCGCGACGGCTCCATGGCCACTGGCAGTT
ACGGCAGTGCACCGAACTACGAGCCCAACAGCTACGCTGAGGCACCGAAGCAGTCGCCACGCCATGCTGAACCCGCGCTG
GCCCTGAACGGTTCGGCAGACCGTTACGATCACCGTGAGGACACCGACTACTTCAGTCACGCCGGCGCGTTGTTCCGCCT
GATGAGCGATGAGCAGAAGGCACTGCTGATCAGCAACATTGCCGGCACCATGGCAGGTGTCAGCGAAGACGTGATCCAGC
GCCAGTTGCAGTACTTCTTCAAGGCTGACCCGGCCTATGGCGAAGGGATTGCCAAGGCGTTGGGCATCAACCTGGCCTGA

Protein sequence :
MSKILTTASGAPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVNRDITHYTSAKLFEQ
IGKQTDTFLRFSTVGGERGSADTERDPRGFAVKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRHPQSNLKNAQMM
WDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAKGERTWVKWHFKTQQGIKNLAPADAARLAGTDPDYAQ
RDLFEAIERGDYPRWTVCIQVMSEAEAASRDENPFDVTKTWSQKDYPLIEVGVLELNRNPLNYFAEVEQAAFGPSNMVPG
VGLSPDRMLQGRVFAYADAHRYRVGTNHQHLPVNAPRCAVNSYQRDGSMATGSYGSAPNYEPNSYAEAPKQSPRHAEPAL
ALNGSADRYDHREDTDYFSHAGALFRLMSDEQKALLISNIAGTMAGVSEDVIQRQLQYFFKADPAYGEGIAKALGINLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 5e-146 62
katA YP_005126717.1 catalase Not tested Not named Protein 3e-108 50
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 3e-103 47
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 3e-103 47
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 3e-103 47
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 3e-103 47