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Name : PP4_52620 (PP4_52620) Accession : YP_008116299.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Virulence Product : putative general secretory pathway protein Function : - COG functional category : - COG ID : - EC number : - Position : 5955501 - 5957174 bp Length : 1674 bp Strand : + Note : - DNA sequence : ATGCACACCCCCGACAACCTGGAACTCGACCTGAAGCACGTGCTACAGGCGCTGCTCGCCGACCAGTACCTGCACGCCAC CGACACCCTGCAAGTGCTCGAACACGCCGCCGCACACCCCACCGCCCACCCCTTGGAACAAGTTGCCGCCTGCTGCCTGA AAGACCGCCGACAACCCGGCCAACTGCTGGACTTGGACAGCCTCTGCCAATGGCTGGCCAACAAGGTCGGCCAGCCCTAC CTGCGTATCGACCCCATGCAACTCGACCTGCCCCAGGTCGCCGGCCTGGTATCCCCCGCTTTCGCCCAGCGCCACGCTAT CCTGATCGTCGCCGACGACCCTTCCGGCATCACCGTGGCCAGCGCCCAGCCTTACCAGAACGACTGGCAGGCTGACCTGG CCCGCAGCCTGGGTCGCCCGATCCGCCGCGTGCTGGCCAACCCGTTGCAGATTCGCCAGTCAGGGCAGTCGTTTCACCGC CTGGCCCAGTCGGTAAAGGGCGCGCAGCACCAGCAATCGACCAGCCTGGGCGAACTCGAACAGTGGCTGGAGCTAGGCAA GCGCCAGGCCGAGGCCAGCGCCGACGACGCGCACATCGTGCATATCGTCGACTGGCTGCTGCAGTACGCCATTGATCAGC GCGCCAGCGATATCCACCTGGAACCCCGACGCGCACAGGGCCAGTTGCGCTACCGCATCGATGGCCTGCTGCACACCGTC TATGCCTTCCCCGCCGGGGTCACCCTGGCGCTGGTCAGCCGCCTGAAACACCTGGGCCGCCTGGACGTTGCAGAAAAGCG CCGCCCGCAGGACGGCCGCCTGCAAAGCCGGCTACCAGGTGGCGGCGAAGTGGAGCTAAGGCTGTCGACCCTGCCGACCC CGTTCGGCGAAAAGCTGGTACTGCGCCTGTTCGACCCGCACCAACTGCACGAGGGCTTCGAGCGCCTCGGTCTGCAGGGG CCACAACTGGCCCAGTGGCAAGGCCTGCTGCGCCAGCGCCAGGGCATCATCCTGGTCACTGGCCCCACCGGTTCCGGCAA GACCAGCACGCTGTACGCCAGCCTCAAGCTGCTGGCCACACCGCAGGTCAACCTGTGCACCATCGAAGACCCTATCGAGC GCCTGGAACCGGCCTTCAACCAGCTGCAGGTACAGCCCGCGCTAGACCTGGGTTTTGCCAGCGCCGTGCGGGCCATGCTG CGCCAGGACCCTGACATCATCATGATCGGCGAGATCCGCGACCGCGAAACGGCGCTGGTGGCGGTGCAGGCGGCCCTGAC CGGGCACCTGGTACTGTCGACCCTGCATACCAACGACGCCTGCGCTGCAATCACCCGCCTGCAAGAGCTGGGTGTGGCCG ACTACCTGATCAAGGCCACGCTGGTCGGGGTCATGGCCCAGCGACTGGTGCGTACTGTGTGCCCAGACTGTGTGGCGAAT CCATCAGCCAGTTGCCTGACCTGCCGTGGCACCGGTTTTCATGGGCGTACGGGCCTGTTCGAGCTGCTGCAGCCCAGCGA AAGCCTGCGTGCATTGATTGGCCCGAACGCCGACCTTACCCGTTTGCGGCAACAGGCACTGGACGATGGCCTGGTTGACC TGCGCCGTTGCGGCGAGGCCAAAGTGGCTTGCGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAGCTGA Protein sequence : MHTPDNLELDLKHVLQALLADQYLHATDTLQVLEHAAAHPTAHPLEQVAACCLKDRRQPGQLLDLDSLCQWLANKVGQPY LRIDPMQLDLPQVAGLVSPAFAQRHAILIVADDPSGITVASAQPYQNDWQADLARSLGRPIRRVLANPLQIRQSGQSFHR LAQSVKGAQHQQSTSLGELEQWLELGKRQAEASADDAHIVHIVDWLLQYAIDQRASDIHLEPRRAQGQLRYRIDGLLHTV YAFPAGVTLALVSRLKHLGRLDVAEKRRPQDGRLQSRLPGGGEVELRLSTLPTPFGEKLVLRLFDPHQLHEGFERLGLQG PQLAQWQGLLRQRQGIILVTGPTGSGKTSTLYASLKLLATPQVNLCTIEDPIERLEPAFNQLQVQPALDLGFASAVRAML RQDPDIIMIGEIRDRETALVAVQAALTGHLVLSTLHTNDACAAITRLQELGVADYLIKATLVGVMAQRLVRTVCPDCVAN PSASCLTCRGTGFHGRTGLFELLQPSESLRALIGPNADLTRLRQQALDDGLVDLRRCGEAKVACGQTRAEEVLRVCS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-69 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-69 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PP4_52620 | YP_008116299.1 | putative general secretory pathway protein | VFG2426 | Protein | 6e-56 | 44 |
| PP4_52620 | YP_008116299.1 | putative general secretory pathway protein | VFG2048 | Protein | 4e-70 | 44 |
| PP4_52620 | YP_008116299.1 | putative general secretory pathway protein | VFG0233 | Protein | 4e-60 | 42 |
