Gene Information

Name : cadR (PP4_52050)
Accession : YP_008116242.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator CadR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5896622 - 5897065 bp
Length : 444 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGATCGGAGAACTGGCCAAAGCCACCGACTGCGCGGTGGAAACCATCCGCTACTACGAGCGTGAACACCTGCTGCC
CGAGCCTGCCCGTACAGAAGGCAACTACCGGCTGTATACCCAGGCCCACGTGGAACGGCTGACCTTCATCCGCAACTGCC
GCACCCTGGACATGACCCTGGAAGAAATCCGCAGCCTGCTTCGCCTGCGCGACAGCCCCGACGACTCGTGCGGCAGCGTC
AATGCGCTGATCGACGAACATATCGAGCATGTGCAGGCGCGGATCGATGGCTTGGTGGCATTGCAAGAGCAGCTGGTGGA
ACTGCGGCGGCGCTGCAGCGCGCAGGGGAGCGAATGCGCGATCTTGCAGCAACTGGAGACGAACGGGGCGGTATCGGTGC
CGGACACCGAGCATTCGCATGTGGGGCGCAGTCACGGGCATTGA

Protein sequence : 
MKIGELAKATDCAVETIRYYEREHLLPEPARTEGNYRLYTQAHVERLTFIRNCRTLDMTLEEIRSLLRLRDSPDDSCGSV
NALIDEHIEHVQARIDGLVALQEQLVELRRRCSAQGSECAILQQLETNGAVSVPDTEHSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 8e-36 55
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 6e-32 49
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-31 49
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 8e-32 49
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 5e-32 49
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 9e-32 49
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 6e-32 49
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 6e-32 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadR YP_008116242.1 MerR family transcriptional regulator CadR BAC0058 Protein 3e-64 96
cadR YP_008116242.1 MerR family transcriptional regulator CadR BAC0301 Protein 2e-34 57
cadR YP_008116242.1 MerR family transcriptional regulator CadR BAC0682 Protein 6e-20 41