|
Name : dnaB (PP4_49440) Accession : YP_008115981.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 5590838 - 5592235 bp Length : 1398 bp Strand : - Note : - DNA sequence : ATGAACGAGATCACAACCTCCGAACAGCTTGACCTGCAAACCGCCGCCCTGAAGGTGCCGCCGCATTCCATCGAGGCCGA ACAGGCCGTGCTCGGTGGCCTGATGCTGGACAACAACGCCTGGGAGCGGGTGCTGGATCAGGTTTCGGATGGCGATTTCT ACCGGCATGACCATCGCCTGATCTACCGTGCCATCCATAAGCTGGTGGACCTTAACCACCCGTTCGACGTGGTCACGTTG CACGAGCAGTTGGACAAGGAAGGCGTTTCGTCGCAGGTCGGCGGCCTGGCTTACTTGGCGGAGCTGGCCAAGAACACGCC ATCGGTGGCCAACATCAAGGCCTACGCCGCGATCATTCGCGAGCGCGCCACGCTGCGCCAGCTGATCAGCATCAGCACCG ATATTGCCGACAACGCCTTCAACCCCCAAGGTCGCAACGCCGAGGAAATTCTCGACGACGCCGAACGGCAGATTTTCCAG ATTGCCGAGGCGCGGCCAAAGACCGGCGGCCCGGTAGGCGTCAACGAGCTGTTGACCAAGGCCATCGACCGCATCGATAC GCTGTTCAACTCTGACAGCGAAATTACCGGTGTTTCCACCGGTTACACCGACCTGGACGAGAAGACCAGCGGCCTGCAGC CGGCGGACTTGATCATTGTCGCCGGCCGACCCTCGATGGGTAAGACCACGTTTGCCATGAACCTGGTCGAGAATGCCGTG CTGCGCAGCGACAAGGCTGTGCTGGTGTTCTCCCTCGAGATGCCAGGTGAATCGCTGATCATGCGTATGCTCTCGTCCTT GGGCCGTATTGACCAGACCAAGGTGCGTTCTGGCCAGCTGGACGACGACGACTGGCCGCGCCTGACTTCGGCAGTCAACC TGCTCAACGACCGCAAGCTGTTCATCGACGATACAGCGGGCATCAGCCCTTCGGAAATGCGTTCGCGGACTCGCCGCCTG GCGCGTGAGCACGGCGAAATCGGCCTGATCATGGTCGACTACCTGCAGTTGATGCAGATTCCAGGTTCCGGTGGTGATAA TCGGACCAACGAAATTTCCGAGATTTCTCGCTCCCTCAAGGCCCTTGCCAAAGAGTTCAACTGCCCGGTCGTAGCACTGT CCCAGCTGAACCGCTCCCTTGAGCAACGGCCAAACAAGCGCCCGATCAACTCCGACTTGCGTGAGTCCGGTGCAATCGAG CAGGACGCCGACGTGATCATGTTCGTCTACCGTGACGAGGTGTATCACCCGGAGACCGAGCACAAGGGCATTGCCGAAAT CATCATCGGCAAACAGCGTAACGGCCCCATCGGCTTTGTACGCCTGGCGTTTATTGGTAAGTACACCCGCTTCGAAAACT TGGCGCCGGGGATGTACAACTTTGATGATGATGAGTGA Protein sequence : MNEITTSEQLDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIYRAIHKLVDLNHPFDVVTL HEQLDKEGVSSQVGGLAYLAELAKNTPSVANIKAYAAIIRERATLRQLISISTDIADNAFNPQGRNAEEILDDAERQIFQ IAEARPKTGGPVGVNELLTKAIDRIDTLFNSDSEITGVSTGYTDLDEKTSGLQPADLIIVAGRPSMGKTTFAMNLVENAV LRSDKAVLVFSLEMPGESLIMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVNLLNDRKLFIDDTAGISPSEMRSRTRRL AREHGEIGLIMVDYLQLMQIPGSGGDNRTNEISEISRSLKALAKEFNCPVVALSQLNRSLEQRPNKRPINSDLRESGAIE QDADVIMFVYRDEVYHPETEHKGIAEIIIGKQRNGPIGFVRLAFIGKYTRFENLAPGMYNFDDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-118 | 58 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 7e-106 | 56 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-103 | 52 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-104 | 52 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-103 | 51 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-99 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-95 | 47 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-95 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 5e-79 | 43 |
