Gene Information

Name : smpB (PP4_47140)
Accession : YP_008115751.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5344991 - 5345473 bp
Length : 483 bp
Strand : +
Note : -

DNA sequence :
ATGGCTAAGCAAAAAAAACATCCGACCGGGACCATCGCGCAAAATAAAAAAGCGCGACACGATTACTTCATCGAACACAA
GTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCTGGCAAGGCGCACCTCGTTGACAGTTACG
TGCTGCTCAAGGACGGTGAAGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACTGCCAGCACCCACGTCATCGCC
GACCCCATCCGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGGCTGGAAGCGGCTGTAGCGCAAAAGGGCTA
CACCTGCGTGGCGTTGTCGCTGTACTGGAGCAAGCACCTGATCAAGTGCGAAATTGCGCTGGGCAAGGGCAAGAAGGAAT
ACGACAAGCGCGACACCGTGCGCGAACGCGATTCCAACCGCGAGCTGCAGCGGGTCGTGCGGAACAAGGGCAAGGAAGAC
TAA

Protein sequence :
MAKQKKHPTGTIAQNKKARHDYFIEHKFEAGLVLSGWEVKSLRAGKAHLVDSYVLLKDGEAWLFGSHITPLTTASTHVIA
DPIRTRKLLLNKRELERLEAAVAQKGYTCVALSLYWSKHLIKCEIALGKGKKEYDKRDTVRERDSNRELQRVVRNKGKED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-28 54
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 5e-19 46
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-18 45