Gene Information

Name : PP4_45380 (PP4_45380)
Accession : YP_008115575.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5148958 - 5149926 bp
Length : 969 bp
Strand : +
Note : -

DNA sequence : 
ATGCACGACCCTTCAGCCCACAGCAAGCCGCGTATCGCCATCAGCGCCTGCCTGACCGGGCACAGCGTGCGTTACAACGG
CGGCCACAAGGCCTCGGACCTGTGCCGTACGCAACTGGATGCTCATTTTGACTGGCTGCCGGTGTGCCCGGAAGTCGCCA
TCGGCCTGGGCGTACCGCGCGACCCGATCCGCCTGGTCGGCAACCCCGAACGACCGGAAGTGGTCGGCACCCGCAACCCT
GGCATGGACTTGACCGACCCACTGCGCAGCTATGGCAAGCAGATGGCCGCCGAGCTCGACGATATCTGCGGCTATATCTT
CATGCAGAAGTCGCCTTCCTGTGGCCTGGAGCGGGTCAAGGTGTATCAGGACAACGGCCATCCGGCCCTCCACGGTGGGC
GCGGCGTTTACGCCCAGGCCTTCTGCGCTCAACGCCCGGACCTGCCGGTAGAAGAAGAAGGCCGCCTGCATGACCCCGTG
CTGCGCGAGAACTTCATCAGCCGCGTGTATGCCTACGCCGACTGGCAGCGCCTGCTTGCCGAGGGCCTTAGCCGTGGCAG
CCTGGTCCGCTTTCATTCGCGTTACAAATACCTGGTGATGGCCAACAACCCGCAGGCCTACAGAACCTTGGGCCGCCTGC
TCGGCAGCATGAGCAAGGATGACGACCCACACAGCATCGGCCCACGCTACTTCAGCGAGCTGATGCAGGCCCTGCGCCGC
TGTGCCAGCCGCGGCACCCACTGCAATGTGTTGCAGCACCTCAGCGGCTATTTCAAGGACAGCCTGACGCAACAGGACAA
GGCCGAGTTGCAGACACTCATCAGCCAGTACCAGCAAGGCGTGGTGCCACTTGTGGTGCCGCTGACCCTGCTCAAGCACC
ATTTGCGCAAGCACCCCGACGCCTATCTGCAGCAGCAAGCCTACCTGCAGCCGCACCCCGAGAGCCTGGGCTTGCGCAAT
GCAGTCTGA

Protein sequence : 
MHDPSAHSKPRIAISACLTGHSVRYNGGHKASDLCRTQLDAHFDWLPVCPEVAIGLGVPRDPIRLVGNPERPEVVGTRNP
GMDLTDPLRSYGKQMAAELDDICGYIFMQKSPSCGLERVKVYQDNGHPALHGGRGVYAQAFCAQRPDLPVEEEGRLHDPV
LRENFISRVYAYADWQRLLAEGLSRGSLVRFHSRYKYLVMANNPQAYRTLGRLLGSMSKDDDPHSIGPRYFSELMQALRR
CASRGTHCNVLQHLSGYFKDSLTQQDKAELQTLISQYQQGVVPLVVPLTLLKHHLRKHPDAYLQQQAYLQPHPESLGLRN
AV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 5e-59 43
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-59 43
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-59 43
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 5e-59 43
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 5e-59 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_45380 YP_008115575.1 hypothetical protein VFG0490 Protein 2e-59 43