Gene Information

Name : PP4_44100 (PP4_44100)
Accession : YP_008115447.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4994578 - 4995996 bp
Length : 1419 bp
Strand : -
Note : -

DNA sequence :
ATGGCCTACATACAAGGAGAGTCTCGCAGCCAGACCAGTCTGTTCCCGGTCTCGCTGGAGGAGCTGATCCCGGAAGATCA
CCTCGTACGGGTCATTGACCTGTATGTCGCCAGGCTCGACCTGGGCCAGCTCGGCTTCGAAAAAGCGCAATCCAAGGCCA
TAGGGCGCCCCGCCTACGACCCCGCCGATCAGCTCAAGCTCTACCTCTATGGCTATTTTCAGCGCATCCGTTCCTCGCGG
CGTTTGGAAGCCGAGTGCCAGCGCAACATCGAGGTGATGTGGCTGATCAACCGGCTCAAACCTGACTTCAAGACCATCGC
TGACTTTCGCAAGAACAACAAAGCCGCTTTCGTTGCGACGTGCCGGGCGTTTGTACAGTTCTGCCGAACCGCCGGTTTGA
TTGCTGGTGACTTGGTTGCCATCGACGGCAGCAAGTTTCAGGCGGTCGCTTCCCCCCGGCGCCATTTGAACCTGAGTCAA
CTCAAGCGTCAGGATGAGAAACTGGACAAGCGGATCGCCCAATATCTGGCTGATCTGGATGCCGCTGACAAGTCTGAGGG
CGAGCAAGTGGTCGATCGCACTGCGATCAAAGCGGCCTTGGCGAAGCTTGAGGCCAAGCAGCAAGACAACCGCACTTGCC
AGGCCTTGATGAAATCAATGGGGCTGGAGCAATTCAACACGCACGAAAGCGATGCCCGCATGATGCGCACTCCCAAAGGA
GCGCGGGTTGCCTATAACGTGCAGACCGCCGTTGACGCAGAACACTGCCTGATTTTGCATCACGAGGTGACGCAAGAGGG
CGATGATCGCAAGCAGCTTGAACCCATGGCTAAAGCGGCCAAGGCTGAGCTGAAACAGAAAGCGCTGACCGTTACAGCTG
ATATGGGTTACTCGAATGGCCAGCAGTTCCAGGCATGTGAGGAAGCCTCCATTACCGCGTACGTTCCGCCAAACCGAACC
TCGAACCCAGGCGGTGAGGCATTATTCGAGCGCAAGGACTTTACCTACGACGCCGAACAGGATCGGTACCAGTGCCCGGC
AGGGCAGTGGCTAACGCTGAAGCAGCGTCACAAGGGCGACCGGATCTACCAGGCGGCGATCAGTGATTGCGCCGGGTGCA
CGCTGAAATCCCAATGCACGACGGCCAAGCGCCGCTATGTCTCGCGCCACGCTCAAGAGGAAGCCTTTGAGCGTATGGCG
CAGCGGATGCAGATGCATCCAGAGATGATGGAACGGCGCAGATCCATCGTGGAGCACCCGTTTGGCAATCTCAAACAATG
GCTGTTTGGCAACGGGCGCTTCCTGCTGCGACAACTCGCAGGCACAAGAGCTGAAATGGCTCTCGCTGTGACCGCTTACA
ACCTCAAGCGGGCGATTAGTGTCCTGGGTGCCAAGCAAATCATGCAACTGATGGGCTGA

Protein sequence :
MAYIQGESRSQTSLFPVSLEELIPEDHLVRVIDLYVARLDLGQLGFEKAQSKAIGRPAYDPADQLKLYLYGYFQRIRSSR
RLEAECQRNIEVMWLINRLKPDFKTIADFRKNNKAAFVATCRAFVQFCRTAGLIAGDLVAIDGSKFQAVASPRRHLNLSQ
LKRQDEKLDKRIAQYLADLDAADKSEGEQVVDRTAIKAALAKLEAKQQDNRTCQALMKSMGLEQFNTHESDARMMRTPKG
ARVAYNVQTAVDAEHCLILHHEVTQEGDDRKQLEPMAKAAKAELKQKALTVTADMGYSNGQQFQACEEASITAYVPPNRT
SNPGGEALFERKDFTYDAEQDRYQCPAGQWLTLKQRHKGDRIYQAAISDCAGCTLKSQCTTAKRRYVSRHAQEEAFERMA
QRMQMHPEMMERRRSIVEHPFGNLKQWLFGNGRFLLRQLAGTRAEMALAVTAYNLKRAISVLGAKQIMQLMG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG74 AAN62296.1 transposase domain protein Not tested PAGI-3(SG) Protein 6e-100 46
tnpA ACY75519.1 transposase Not tested Tn6060 Protein 1e-98 45
tnpA ACY75536.1 transposase Not tested Tn6060 Protein 1e-98 45
unnamed CAD91340.1 hypothetical protein Not tested Not named Protein 1e-98 45