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Name : kdsD (PP4_43510) Accession : YP_008115388.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Virulence Product : D-arabinose-5-phosphate isomerase Function : - COG functional category : - COG ID : - EC number : - Position : 4931494 - 4932468 bp Length : 975 bp Strand : + Note : - DNA sequence : ATGAGCCAATCCAGCGAGCTGATCCAATCCGCCCAACGCACCCTGCGCCTGGAACTCGAGGCCGTAGAGGCCCTGTTGGC GCGCATCGACGACAATTTCGTCAAAGCCTGCGAACTGATCCTGGCCAGCAAGGGCCGGGTGGTCGTGGTCGGCATGGGCA AGTCCGGGCATATCGGCAACAAGATCGCCGCCACCCTGGCCAGCACCGGTACGCCGGCGTTTTTCGTGCACCCGGCTGAA GCCAGCCATGGCGACATGGGCATGATCACCCGCGATGATGTCATCCTTGCCCTGTCGAATTCCGGTAGCACTGCCGAAAT CGTCACCCTGCTGCCACTGATCAAACGCCTGGGCATCAAGCTGGTCAGCCTGACCGGCAACCCCGATTCGCCCCTGGCCC AGGCCGCCGAGGTCAACCTCGACGCCCGCGTAGAGCAAGAGGCCTGCCCACTTAACCTGGCACCCACCTCTTCCACCACC GCATCGCTGGTGCTGGGCGACTGCCTGGCCATCGCCCTGCTCGAAGCCCGCGGCTTCACGGCAGAAGACTTTGCCTTCTC GCACCCGGGCGGTGCACTGGGCCGCCGCCTGTTGCTCAAGGTCGAGAACGTGATGCACAGCGGCGACGAGCTGCCCCAGG TAGCCCGCGGCACCCTGCTCAAGGATGCGCTGCTTGAAATGTCCCGCAAAGGTCTGGGCATGACCGTGATCGTCGAAGCC GACGGCACGCTGGCCGGGATCTTCACCGACGGCGACCTGCGCCGCAGCCTGGACCGCAACATCGACGTACACACCACCCT GATCGACCAGGTGATGACCGTGCACGGCAAGACGGCCCGCGCCGAAATGCTCGCTGCCGAAGCCTTGAAGATCATGGAAG ACCACAAGATCGGCGCACTGGTGGTGGTGGACCGCGAGGACCGCCCGACCGGCGCCCTGAACATGCACGACCTGCTGCGC GCCGGTGTAATGTAA Protein sequence : MSQSSELIQSAQRTLRLELEAVEALLARIDDNFVKACELILASKGRVVVVGMGKSGHIGNKIAATLASTGTPAFFVHPAE ASHGDMGMITRDDVILALSNSGSTAEIVTLLPLIKRLGIKLVSLTGNPDSPLAQAAEVNLDARVEQEACPLNLAPTSSTT ASLVLGDCLAIALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHSGDELPQVARGTLLKDALLEMSRKGLGMTVIVEA DGTLAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARAEMLAAEALKIMEDHKIGALVVVDREDRPTGALNMHDLLR AGVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-55 | 44 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 4e-55 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 6e-55 | 43 |
