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Name : xcpS (PP4_42680) Accession : YP_008115305.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Virulence Product : type II secretion system protein XcpS Function : - COG functional category : - COG ID : - EC number : - Position : 4834142 - 4835344 bp Length : 1203 bp Strand : - Note : - DNA sequence : ATGCCGACCTATCGCTACTTGGCCGTCGACCTCGCCGGCAAGACCCGCAAGGCCAGCGTGCAGGCTGACAGTGAACGCCA TGCGCGTCAGTTGCTGCGCGATCAGGGGCTTTTTGCCCGCCAGTTGCAGCGCCAGGACAGCAGTAATCGGCAACCCCGGC GCCAGCGTTTGAGCCGTGCCCAGCTGTGTGAACTGACCCGTCAGCTGGCCACATTGACCGGTGCCGGCATCCCCTTGGTC GATGCCTTGGGCACCCTTGAGCGTCAGTTGCGTCAACCTGCCCTGCACAGTGTGATGGTGGCCCTGCGTGGCTCCCTTGC CGAAGGCCTGGGCCTGGCCCGCAGCCTGGCGCGCCAGGGGGCGCCATTCACTGGCTTGTACTGCGCGCTGGTCGAGGCCG GCGAACGCTCCGGGCGCCTGGCACAGGTGCTGACCCGGCTGGCCGATCACCTTGAACAGGTGCAACGGCAACAGCACAAG GCGCGTACTGCGCTGATCTATCCCACCGTACTGATGGGCGTATCGCTTGCCGTGGTCGTAGGCCTGATGACTTTTGTCGT GCCCAAGCTCACCGAACAGTTTGCCCACGCGGGGCAAAGCCTGCCGCTGATCACCGCGTTGCTGATCGGCCTGAGCGAGG GGCTGGTGCAGGCCGGGCCCTGGTTGCTGGGCCTGGCGCTATTGATGGGCGTGCTCGGCACCTTGCTGTTGCGCAAGCCG CACTGGTGCCTGCGCCGCGACCAGATGCTGCTGTGCCTGCCTCGTATCGGCAGCCTGTTGCAGGTGCTGGAAAGCGCACG CCTGGCACGCAGCCTGGCGATTCTCAGCGGCAGTGGCGTAGCCCTGCTCGAAGCCTTGCAAGTAGCTACCGAAACGGTCG GCAACCGGCGCATCCGCCTGGCCATGGAGCAGGTCCGCCAGCAAGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGAT GCCAGCCAGCAATTCCCACCGCTGCTGGTGAACATGGTCGGCAGCGGCGAGGCCAGCGGCACCCTGGCCGACATGCTTGA GCGCGTGGCCGACGACCAGGAGCGTGGCTTTGCCCGCCAGGTGGATACCGCCATGGCGCTGTTCGAACCCCTGATGATCC TGGTGATGGGCGCTGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAACTG TGA Protein sequence : MPTYRYLAVDLAGKTRKASVQADSERHARQLLRDQGLFARQLQRQDSSNRQPRRQRLSRAQLCELTRQLATLTGAGIPLV DALGTLERQLRQPALHSVMVALRGSLAEGLGLARSLARQGAPFTGLYCALVEAGERSGRLAQVLTRLADHLEQVQRQQHK ARTALIYPTVLMGVSLAVVVGLMTFVVPKLTEQFAHAGQSLPLITALLIGLSEGLVQAGPWLLGLALLMGVLGTLLLRKP HWCLRRDQMLLCLPRIGSLLQVLESARLARSLAILSGSGVALLEALQVATETVGNRRIRLAMEQVRQQVQGGTSLHRALD ASQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQGLQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 4e-55 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-54 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpS | YP_008115305.1 | type II secretion system protein XcpS | VFG0181 | Protein | 1e-57 | 41 |
