Gene Information

Name : xerD (PP4_42430)
Accession : YP_008115280.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4814798 - 4815694 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence :
ATGCCCGCCCTCGACCACCCCCTGATCGACCAGTTTCTCGACGCCCTGTGGCTTGAAAAAGGCCTGTCCGACAACACCCG
CGTGTCCTACCGCAGCGATCTGGCGCTGTTCAACGGCTGGTTGCAGGAACATTCGGTTTCCCTGCCCGACGCCGGCCGTG
ACCTGATCCTCGACCACCTGGCCTGGCGCCTCGATCAGGGCTACAAGCCACGCTCCACGGCGCGCTTCCTGTCCGGCCTG
CGCGGTTTCTTCCGCTATCTGCTGCGGGAAAAGCTGGTGGCGGTAGACCCGACCCTGCAGGTCGACATGCCGCAACTAGG
CAAGCCGCTGCCCAAGTCGTTGTCCGAAGCCGACGTTGAAGCCTTGCTGCAGGCCCCGGACCTGGGCGAAGCCATCGGCC
AGCGCGACCGCGCCATGCTCGAAGTGCTCTATGCGTGCGGCCTGCGCGTCACCGAGCTGGTCAGCCTGACCCTCGACCAG
GTCAACCTGCGCCAGGGTGTGCTGCGGGTGATGGGCAAGGGCAGCAAGGAGCGCCTGGTGCCCATGGGCGAGGAGGCAGT
GGTGTGGCTGGAGCGCTACCAGCGCAATGGCCGTGCCGAGTTGCTCAATGGCCGCCCCAGCGATGTGCTGTTCCCCAGCC
AGCGCGGCGAGCAGATGACCCGCCAGACTTTCTGGCACCGCATCAAGCACCATGCCCGGGTGGCAGGTATCGACAAATCG
CTGTCGCCGCACACGCTGCGCCACGCGTTCGCCACCCACCTGCTCAACCATGGCGCCGACCTGCGCGTGGTGCAGATGCT
GCTTGGTCACAGCGACCTTTCGACCACCCAGATCTACACCCACGTCGCCAAGGCCCGCCTGCAGCAGTTGCACGCGCAGC
ACCACCCGCGTGGATGA

Protein sequence :
MPALDHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLILDHLAWRLDQGYKPRSTARFLSGL
RGFFRYLLREKLVAVDPTLQVDMPQLGKPLPKSLSEADVEALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQ
VNLRQGVLRVMGKGSKERLVPMGEEAVVWLERYQRNGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGIDKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-66 62
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-66 62