Gene Information

Name : hom (PP4_42410)
Accession : YP_008115278.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4812513 - 4813817 bp
Length : 1305 bp
Strand : -
Note : -

DNA sequence :
GTGAAACCGGTCAAAGTAGGCATCTGTGGGTTGGGGACCGTCGGTGGCGGAACCTTCAATGTACTTCAGCGCAACGCCGA
GGAGATTGCCCGCCGTGCCGGGCGCGGTATTGAAGTGGCACAGATCGCCATGCGCTCGCAGAACCCGAACTGCCAGATTA
CCGGTACCCCCATTACCGCTGACGTGTTCGAAGTTGCGAGCAACCCGGAGATCGACATTGTCATCGAGCTGATCGGTGGC
TACACCATCGCCCGCGACCTGGTGCTCAAGGCCATCGAAAACGGCAAGCACGTGGTCACCGCCAACAAGGCGCTGATTGC
CGTGCACGGTAACGAAATCTTTGCCAAGGCCCGCGAGAAGGGCGTGATCGTCGCCTTCGAAGCGGCCGTGGCGGGCGGCA
TCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCATCAACGGCACCGGC
AACTTCATCCTCACCGAAATGCGTGAGAAGGGCCGTGCCTTCCCGGACGTGCTGGCCGAAGCCCAGGCGCTGGGTTACGC
CGAAGCCGACCCGACCTTCGACGTCGAGGGCATCGACGCCGCGCACAAGCTGACCATCCTGGCGTCGATCGCTTTTGGCA
TTCCGCTGCAGTTCGACAAGGCCTACACCGAAGGCATTACCCAGCTGACCACTGCTGACGTGAACTATGCCGAGGCCCTG
GGCTACCGCATCAAGCACCTGGGCGTGGCGCGTCGCACCGCCGAAGGCATCGAGCTGCGCGTGCACCCGACGCTGATACC
GGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCTGTCATGGTCAACGGTGACGCCGCCGGTTCCACCCTGT
ACTACGGTGCGGGCGCCGGCATGGAGCCTACTGCTTCGTCGGTGGTGGGCGACCTGGTCGACGTGGTCCGTGCCATGACC
TCCGACCCGGAAAACCGCGTACCGCACCTGGCCTTCCAGCCAGACTCGCTGTCGGCGCACCCGATTCTGCCGATCGAAGC
CTGCGAAAGCGCCTACTACCTGCGCATCCAGGCCAAGGATCACCCGGGCGTACTGGCCCAGGTGGCCAGCATCCTGTCGG
AGCGTGGCATCAACATCGAGTCGATCATGCAGAAGGAAGCCGAGGAGCAGGACGGCCTGGTGCCGATGATCCTCCTGACC
CATGGTGTGGTCGAACAGAGCATCAACGACGCCATCGTCGCCCTGGAAGCCCTGCAGGACGTGATCGGCAAGGTCGTGCG
TATCCGCGTCGAACAGCTCAACTGA

Protein sequence :
MKPVKVGICGLGTVGGGTFNVLQRNAEEIARRAGRGIEVAQIAMRSQNPNCQITGTPITADVFEVASNPEIDIVIELIGG
YTIARDLVLKAIENGKHVVTANKALIAVHGNEIFAKAREKGVIVAFEAAVAGGIPVIKAIREGLSANRINWLAGIINGTG
NFILTEMREKGRAFPDVLAEAQALGYAEADPTFDVEGIDAAHKLTILASIAFGIPLQFDKAYTEGITQLTTADVNYAEAL
GYRIKHLGVARRTAEGIELRVHPTLIPADRLIANVNGVMNAVMVNGDAAGSTLYYGAGAGMEPTASSVVGDLVDVVRAMT
SDPENRVPHLAFQPDSLSAHPILPIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEAEEQDGLVPMILLT
HGVVEQSINDAIVALEALQDVIGKVVRIRVEQLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 6e-114 59
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 6e-114 59