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Name : lysS (PP4_42160) Accession : YP_008115253.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 4786059 - 4787561 bp Length : 1503 bp Strand : - Note : - DNA sequence : ATGAGCGACCTCAAGACCGACTCGCAAGACCTGCAACAGGAAGAAAATGCCCTGATCGCCCTGCGCAAGGAAAAACTTGC CGCCGAGCGCGCCAAAGGCAACGCCTTCCCCAACGACTTCCGTCGCGACAGCTACTGCAACGACCTGCAGAAACAGTACG CGGACAAGACCAAGGAAGAGCTGGAAGCAGCCGCGATTCCGGTCAAGGTTGCCGGCCGTATCATGCTCAACCGTGGCTCG TTCATGGTTATCCAGGACATGACCGGTCGCATCCAGGTCTACGTCAACCGCAAGACCCTGTCGGAAGAAACCCTGGCCGC AGTCAAGACCTGGGACCTGGGCGACATCATCAGCGCCGAAGGCACCCTGGCACGTTCCGGCAAGGGTGACCTGTACGTCG AAATGACCAACGTGCGCCTGCTGACCAAGTCGCTGCGCCCGCTGCCCGACAAGCACCACGGCCTGACCGACACCGAACAG CGCTACCGCCAGCGTTACGTCGACCTGATGGTCAACGAAGAAACCCGCCACACCTTCCGTGTGCGTTCGCAGGTGATCTC GCACATTCGCAAGTTCCTCACCGAGCGTGACTTCCTCGAAGTCGAGACGCCGATGCTGCAAACCATCCCGGGCGGCGCGG CGGCCAAGCCGTTCGAAACCCACCACAACGCCCTGGACATGGCCATGTTCCTGCGTATCGCGCCGGAGCTGTACCTCAAG CGCCTGGTGGTGGGCGGCTTTGAGAAAGTGTTCGAGATCAACCGCAACTTCCGTAACGAAGGTGTTTCGACGCGTCATAA CCCCGAATTCACCATGCTCGAGTTTTACCAGGCCTACGCCGACTACAACGACAACATGGACCTCACCGAGGAACTGTTCC GCGAGCTGGCGCAGTTGGTACTGGGCAGCACCGACGTGCCTTACGGCGACAAGGTGTTCCATTTCGGCGAGCCGTTCGTG CGCCTGTCGGTGTTCGACTCGATCCTCAAGTACAACCCGGAACTGACCGCTGCCGACCTGCAGGACGTTGACCGCGCCCG CGACATCGCCAAGAAGGCCGGTGCCAAGGTGCTGGGCCACGAAGGCCTGGGCAAGCTGCAGGTGATGATTTTCGAAGAGC TGGTCGAGCACAAGCTGGAGCAGCCTCACTTCATCACCGAGTACCCGTTCGAAGTGTCGCCGCTGGCTCGTCGCAACGAC GACAACCCGGCCGTTACCGACCGCTTCGAGCTGTTCATCGGTGGCCGCGAAATCGCCAACGCCTACTCCGAGCTCAACGA TGCCGAAGACCAGGCCGAGCGCTTCCTGGCCCAGGTGGCCGAGAAGGACGCTGGTGACGACGAAGCCATGCACTACGACG CCGACTTCGTGCGTGCGCTGGAGTACGGCATGCCGCCGACCGCCGGTGAAGGCATCGGCATCGACCGCCTGGTCATGTTG CTGACCAACTCGCCGTCGATCCGCGACGTGATCCTGTTCCCGCACATGCGTCCACAGGCCTGA Protein sequence : MSDLKTDSQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEELEAAAIPVKVAGRIMLNRGS FMVIQDMTGRIQVYVNRKTLSEETLAAVKTWDLGDIISAEGTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLTERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYNDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV RLSVFDSILKYNPELTAADLQDVDRARDIAKKAGAKVLGHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRND DNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-137 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-79 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008115253.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-137 | 60 |
