Gene Information

Name : mutS (PP4_41420)
Accession : YP_008115179.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4704206 - 4706779 bp
Length : 2574 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGATCTTTCCGCACACACCCCGATGATGCAGCAGTACTGGAAGCTGAAGAACCAGCACCCGGACCAGCTGATGTT
CTACCGCATGGGCGACTTCTACGAAATCTTCTACGAAGATGCGAAGAAGGCCGCGAAACTGCTGGACATCACCTTGACCG
CGCGCGGTCAGTCGGCCGGCCAGTCCATCCCCATGTGCGGGATTCCGTTCCATTCGCTGGAAGGCTACCTGGCCAAGCTG
GTCAAGCTGGGCGAATCGGTGGTGATCTGCGAACAGATTGGCGACCCGGCCACCAGCAAGGGCCCGGTGGAGCGCCAGGT
GGTGCGCATCATCACCCCAGGCACGGTCAGCGACGAGGCGCTGCTGGACGAGCGTCGCGACAACCTGATTGCCGCGCTGC
TTGGTGACGAACGCCTGTTCGGCCTGGCCGTGCTGGACATCACCAGCGGCAATTTCAGCGTGCAGGAAATCAAAGGCTGG
GAGAACCTGCTGGCCGAGCTTGAGCGCCTCAACCCGGTCGAGCTGCTGATCCCTGACGACTGGCCACGCGACCTGCCCGC
CGAAAAACGCCCGGGCGCCCGCCGCCGTGCGCCGTGGGACTTCGACCGCGATTCGGCGCGCAAGGCCCTGTGCCAGCAGT
TCGCGACCAAGGACCTCAAGGGCTTTGGCTGCGACAAGCTGACCCTGGCCATCGGCGCCGCCGGCTGCCTGCTGACCTAC
GCCAAGGAAACCCAGCGCACCGCCCTGCCGCACCTGCGCAGCCTGCGCCACGAACGCCTGGACGACACGGTCATCCTCGA
TGGCGCCAGCCGTCGCAACCTGGAGCTGGACGTCAACCTGGCGGGCGGGCGTGACAACACCCTGCAATCGGTGGTCGACC
GCTGCCAGACTGCCATGGCCAGCCGCTTGCTGAGCCGGTGGCTGAACCGCCCGTTGCGCGACCTCAAGGTATTGCAGGCA
CGCCAGGACTCGATCCGCTGCCTGCTCGACAGCTACAGCTTCGAGAAGCTGCAGCCGCAGCTGAAAGAAATTGGCGACAT
CGAGCGGATCCTCGCCCGAATCGGCCTGCGCAATGCCCGCCCTCGCGACCTGGCGCGCCTGCGCGATGCATTGGGTGCCT
TGCCCGAACTGCAGAATGCCATGAGCGAGCTGGAGGCGCCGCACCTTGCGCGCCTGGCGGCCATTACCGGCACCTATCCG
GAGCTGGCCAGCCTGCTGGAGCGGGCGATCATCGACAACCCGCCAGCGGTGATCCGCGACGGCGGCGTACTCAAGACCGG
CTATGACAACGAGCTGGATGAGCTGCTGGCGATCAGCGAGAACGCCGGCCAGTTCCTGATCGACCTGGAAACCCGTGAAA
AGGCCCGCACCGGCCTTGCCAACCTCAAGGTCGGCTACAACCGCGTGCACGGCTACTTCATCGAGCTGCCGACCAAGCAG
GCCGAGCAGGCGCCGGGCGACTACATCCGCCGTCAGACCCTCAAGGGCGCCGAGCGCTTCATCACCCCCGAGCTGAAAGT
GTTCGAGGACAAGGCGCTGTCGGCCAAGAGCCGCGCCCTGGCCCGTGAGAAGATGCTCTACGACGCCCTGCTGGAAACCC
TGATCAGCCACCTGGCGCCGCTGCAAGACAGCGCCGCCGCCCTGGCCGAACTGGATGTGCTCAGCAACCTGGCCGAACGT
GCGCTGAACCTCGACCTGAACTGCCCGCGCTTCGTCGACGAGCCGTGCCTGCGTATCGAGCAAGGCCGCCACCCGGTCGT
GGAGCAGGTACTGACCACGCCGTTCGTGGCCAACGACCTGGGCCTGGACAACAGCACGCGCATGCTGATCATCACCGGCC
CGAACATGGGCGGTAAGTCCACTTACATGCGCCAGACCGCCCTGATCGTGCTGCTGGCGCACATCGGCAGCTTCGTGCCG
GCGGCCAGCTGCGAACTGTCGCTGGTCGACCGCATCTTCACCCGCATCGGCTCCAGCGACGATCTGGCCGGCGGGCGTTC
GACCTTCATGGTCGAGATGAGCGAAACCGCCAACATCCTGCACAACGCGACCGACCGCAGCCTGGTGCTGATGGACGAAG
TGGGCCGCGGCACCAGTACGTTCGACGGCCTGTCGCTGGCGTGGGCTGCCGCCGAGCGCCTGGCCCAGTTGCGCGCCTAT
ACCCTGTTCGCCACCCACTACTTCGAGCTCACCGTGCTGCCGGAGAATGAGCCGCTGGTGGCCAACGTGCACCTGAATGC
AACCGAGCACAACGAGCGCATCGTGTTCCTGCACCATGTACTGCCTGGCCCTGCCAGCCAGAGCTACGGCCTGGCCGTGG
CACAACTGGCTGGGGTGCCGGGGGTCGTGATCCAGCGTGCTCGCGAACACCTGGCGCGCCTGGAAACCACCAGCCTGCCG
CATGAACACGCCCCGGCCGAAAAGGCCAGGGATGTGCCACAAGTACCGCACCAGAGCGATCTGTTCGCCAGCCTGCCACA
CCCGGCCATCGAGAAGCTGGGCAAGCTGCAGCTGGACGACATGACCCCGCGCCAAGCTATCGAAATGCTATATCAACTAA
AGAACCTGTTATAA

Protein sequence :
MSDLSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFHSLEGYLAKL
VKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEALLDERRDNLIAALLGDERLFGLAVLDITSGNFSVQEIKGW
ENLLAELERLNPVELLIPDDWPRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATKDLKGFGCDKLTLAIGAAGCLLTY
AKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDVNLAGGRDNTLQSVVDRCQTAMASRLLSRWLNRPLRDLKVLQA
RQDSIRCLLDSYSFEKLQPQLKEIGDIERILARIGLRNARPRDLARLRDALGALPELQNAMSELEAPHLARLAAITGTYP
ELASLLERAIIDNPPAVIRDGGVLKTGYDNELDELLAISENAGQFLIDLETREKARTGLANLKVGYNRVHGYFIELPTKQ
AEQAPGDYIRRQTLKGAERFITPELKVFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLAER
ALNLDLNCPRFVDEPCLRIEQGRHPVVEQVLTTPFVANDLGLDNSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVP
AASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAY
TLFATHYFELTVLPENEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPGVVIQRAREHLARLETTSLP
HEHAPAEKARDVPQVPHQSDLFASLPHPAIEKLGKLQLDDMTPRQAIEMLYQLKNLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_008115179.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 60