Gene Information

Name : arsB (PP4_35500)
Accession : YP_008114587.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Resistance
Product : arsenite pump
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4037216 - 4038499 bp
Length : 1284 bp
Strand : +
Note : -

DNA sequence :
ATGCTCCCAGCCACGCTGATTTTCCTGTTCACCCTGACCCTGGTCATCTGGCAACCCAAAGGCCTCGGCGTCGGCTGGAG
CGCCACCTTCGGTGCGCTTCTGGCCCTGCTGTGCGGTGTGGTGTCACTGCACGATATCCCCACCGTCTGGGCAATCATCT
GGAACGCCACCGCCACCTTCATCGCCCTGATCGTCATCAGCCTGTTGCTGGACGAAGCCGGTTTCTTCGCCTGGACGGCG
CTGCATGTGGCGCGTTGGGCCCGAGGCGACGGGCGTCGCCTGTTTGCCTTCATGGTGCTGCTGGGGGCAGCGGTATCCGC
GCTGTTCGCCAACGATGGCGCAGCACTGATCCTTACCCCCATCGTCATGTCGATGCTGCTGGCGCTGCGCTTTTCCCCCA
CGGCAACCCTGGCGTTCGTGATGGGCGCCGGTTTTATCGCCGACACCGCAAGCCTGCCATTGGTGGTATCGAACCTGGTA
AACATCGTGTCGGCGGACTACTTCGGGCTCGGCTTCAACGCCTACGCCGCCGTGATGGTGCCGGTGAACCTGGTGGCGGT
AGCGGCCACGCTGCTGGTGCTGTGGCTGTATTTTCGCCGTGACATCCCGTTGCGGTACGCCACCGACGACCTGCAGTTGC
CTGCCCTGGCAGTGCGCGATCGCGCCACGTTCCGTGCGGGCTGGGTGGTACTGGTGGTGTTGCTGGCCGCGCTGTTCGTG
CTGGAGCCGCTGGGCATCCCGGTCAGCGCGGTGGCCACGGCCTGCGCCGCCGTGCTGTTTGCCGTGGCCGCCCGCGGCCA
CGTGATTTCAACCCGCCGCGTGCTGCGCGAAGCACCGTGGCAGATCGTGGTGTTCTCGCTGGGGATGTACCTGGTGGTGT
ACGGGCTGCGCAATGCCGGCCTGACTGACGCCCTTGCCGGGGTACTGGACTGGCTCGCCGGGCATGGGCTGTGGGCGGCT
ACGCTGGGCACCGGGCTGATTGCGGCGCTGCTCTCGTCGCTGATGAACAACCTGCCCAGTGTGCTGATCGGCGCCTTGTC
CATCCATGCCAGCGAAGCCCAGGGCGTGGTGCGCGAGGCGATGATCTACGCCAATGTCATCGGCTGCGACCTGGGGCCGA
AGATCACCCCGATCGGCAGCCTGGCCACGTTGCTGTGGCTGCATGTGCTGGCGCGCAAAGGGGTGGTGATCGGCTGGGGG
TATTACTTCAAGGTCGGCGTACTGCTGACGGTGCCAGTGCTGCTGGCGACCTTGGCGGCCCTGGCACTGCGGTTGAGTTT
TTGA

Protein sequence :
MLPATLIFLFTLTLVIWQPKGLGVGWSATFGALLALLCGVVSLHDIPTVWAIIWNATATFIALIVISLLLDEAGFFAWTA
LHVARWARGDGRRLFAFMVLLGAAVSALFANDGAALILTPIVMSMLLALRFSPTATLAFVMGAGFIADTASLPLVVSNLV
NIVSADYFGLGFNAYAAVMVPVNLVAVAATLLVLWLYFRRDIPLRYATDDLQLPALAVRDRATFRAGWVVLVVLLAALFV
LEPLGIPVSAVATACAAVLFAVAARGHVISTRRVLREAPWQIVVFSLGMYLVVYGLRNAGLTDALAGVLDWLAGHGLWAA
TLGTGLIAALLSSLMNNLPSVLIGALSIHASEAQGVVREAMIYANVIGCDLGPKITPIGSLATLLWLHVLARKGVVIGWG
YYFKVGVLLTVPVLLATLAALALRLSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-108 72
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-83 55
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-82 54
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 7e-83 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_008114587.1 arsenite pump BAC0578 Protein 2e-108 73
arsB YP_008114587.1 arsenite pump BAC0576 Protein 4e-109 73
arsB YP_008114587.1 arsenite pump BAC0031 Protein 1e-108 73
arsB YP_008114587.1 arsenite pump BAC0577 Protein 8e-107 72
arsB YP_008114587.1 arsenite pump BAC0574 Protein 1e-83 55
arsB YP_008114587.1 arsenite pump BAC0575 Protein 4e-83 54