Gene Information

Name : PP4_35010 (PP4_35010)
Accession : YP_008114538.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3983767 - 3984450 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence :
ATGGGCCCCAACATACTCGTTGCGCAGAACCTTAGCAAAGTGGTCCCCAGCGCGGAAGGTGACCTGACGATCCTCCACGC
ACTCTCCCTCGAACTGGCCAAAGGCGACAGCCTGGCCATCGTCGGCGCCTCGGGCTCAGGCAAGTCGACCCTGCTCGGTC
TGCTCGCCGGCCTCGACCTGCCCAGTGCCGGCAAGGTCATCCTCGCCGGCAACGACCTGGGGCCACTGGATGAAGACCAG
CGCGCCCGGGTACGCGCCGAACATGTGGGTTTCGTGTTCCAGTCATTCCAGTTGCTCGACAGCCTCAATGCGCTGGAAAA
CGTCATGCTGCCACTGGAGCTGGACGGCCGCCGCGATGCCCGCGAGCAGGCGCGCTCCCTGCTGGAGCGGGTCGGCCTCG
GCAAGCGCCTGAGCCACACCCCACGCCAACTGTCGGGCGGCGAACAGCAGCGGGTAGCCATCGCCCGCGCCTTCGCCGCA
CAACCTGCGGTGCTGTTTGCCGACGAGCCCACCGGCAACCTCGACAGCCACACGGGTGAGCGCATCAGCGACTTGCTGTT
TGACTTGAACAAGGAGCGCGGTACCACCCTGGTGCTGGTTACCCATGACGAACGCCTGGCCCGGCGCTGTCGCCGCCAGA
TCCGCCTGGACGCGGGGCGCCTGGTGGCGCCGGTGGAGGCTTGA

Protein sequence :
MGPNILVAQNLSKVVPSAEGDLTILHALSLELAKGDSLAIVGASGSGKSTLLGLLAGLDLPSAGKVILAGNDLGPLDEDQ
RARVRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRRDAREQARSLLERVGLGKRLSHTPRQLSGGEQQRVAIARAFAA
QPAVLFADEPTGNLDSHTGERISDLLFDLNKERGTTLVLVTHDERLARRCRRQIRLDAGRLVAPVEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-21 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-21 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-21 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_35010 YP_008114538.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-26 51
PP4_35010 YP_008114538.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-29 48