Gene Information

Name : PP4_28300 (PP4_28300)
Accession : YP_008113867.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : putative general secretory pathway protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3216798 - 3217346 bp
Length : 549 bp
Strand : +
Note : -

DNA sequence : 
ATGACCACGACGCAAGCACTGTGCCGCTTCCTGTACCGCATGGCGCAAGGCCCCGAGGCAGACGTGCACGGCTGTTGCAT
GGTGCTTGGCAACCCGTGTCCCCATGCAGTGGAGGGCTTCACCATGCAGTGCAGAACCAAACCGCAACGTGGCTTCACCC
TGCTCGAACTCCTGGTGGTGCTGGTGGTGCTCGGCCTGTTGGCCGGCATCGTCGCGCCCAAGTACTTCAGCCAGCTCGGT
CGCTCCGAAGCCAAGGTGGCGCGGGCGCAGATAGAAGGGCTGGGCAAGGCGCTGGATTTGTATCGCCTGGAGGTCGGCCA
CTACCCCAACAGCGAGCAAGGCCTGCAGGCCCTGGTAATCGCCCCCAGTGGCGAAGCGCGCTGGACCGGCCCGTACCTGC
AGAAGGCCGTGCCCCAGGACCCATGGGGCCGCCCTTACATCTACCGGCAACCTGGCGAAAACGGTGGTGAATACGACCTG
CTGTCGATGGGCAAGGACGGCCAGCCCGGCGGTGACGGGGAAAACGCCGAAATTACCAGCTGGCAGTAA

Protein sequence : 
MTTTQALCRFLYRMAQGPEADVHGCCMVLGNPCPHAVEGFTMQCRTKPQRGFTLLELLVVLVVLGLLAGIVAPKYFSQLG
RSEAKVARAQIEGLGKALDLYRLEVGHYPNSEQGLQALVIAPSGEARWTGPYLQKAVPQDPWGRPYIYRQPGENGGEYDL
LSMGKDGQPGGDGENAEITSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-19 43
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_28300 YP_008113867.1 putative general secretory pathway protein VFG1871 Protein 1e-18 44
PP4_28300 YP_008113867.1 putative general secretory pathway protein VFG0180 Protein 5e-19 43
PP4_28300 YP_008113867.1 putative general secretory pathway protein VFG2050 Protein 9e-20 42