Gene Information

Name : PP4_02640 (PP4_02640)
Accession : YP_008111301.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Unknown
Product : putative RNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 309375 - 311699 bp
Length : 2325 bp
Strand : -
Note : -

DNA sequence :
ATGGACAGCATCAACAGCCGTATCGCCGAGGAACTGGGCGTACGCCCCCAGCAGGTCGAGGCGGCCGTGGGCCTGTTGGA
CGAAGGCTCGACCGTGCCCTTCATCGCCCGGTACCGCAAGGAAGTGACCGGTAGCCTGGACGACACCCAGCTGCGCCATC
TGGAAGAGCGCCTGCGCTACCTGCGCGAACTCGACGACCGTCGCGCCAGCATCCTGGCCAGCATCGAGGAACAGGGCAAG
CTGACCCCGGAACTGGCCCGCGAAATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCA
GAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTGGGCGACCTGGCCGACGGCCTGTTCAACGACCCCAACC
TGGCCCCGGAAAGCGAAGCCGCACGCTTCGTAAACGCCGAAAAAGGCGTAGCCGACGTCAAGGCCGCGCTGGAAGGTGCC
AAATACATCCTCATGGAGCGCTTCGCCGAAGACGCCGCCCTGCTCGACAAGCTGCGCAGCTTCCTCAAGCAGGAAGCCGT
GCTCAGTGCCCGTGTGGTGGCCGGCAAGGAAGAAGAAGGCGCCAAGTTCCGCGACTACTTTGCGCACGACGAACTGCTGC
GCAACGCCCCGTCGCACCGTGCCCTGGCGATCTTCCGCGGGCGCAACGAAGGCGTGCTGAGCGCCTCGCTGAAAGTGGGC
GAAGAACTGCCTGGCACCCTGCACCCGTGCGAAGTGATGATCGGCAACCACGTCGGCATTGAAAACCGCAGCCGCCCGGC
CGACAAATGGCTGGGCGAGGTGGTGCGCTGGACCTGGAAGGTCAAGCTGTACACCCACCTGGAAACCGACCTGTTCGGCG
AACTGCGCGACAACGCCGAAGGCGAGGCGATCAACGTGTTCGCCCACAACCTGCACGACCTGCTGCTGGCCGCCCCGGCC
GGCCCGCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGCACCGGTTGCAAGATCGCCGTGGTCGATGCCACCGGCAAGCT
GCTGGACTACACCACGGTGTACCCGCACGCGCCAAAGAATGACTGGGACCGCACCATTTCCATCATGGCCGCACTGTGCG
CCAAGCACTCGGTGGAACTGATCGCCATCGGCAACGGCACCGCCAGCCGCGAGAGCGACAAGCTGGTGGCCGAACTGGTC
AAAAAATACCCAGCGCTGAAAATTACCAAGATCATGGTCTCCGAGGCCGGTGCGTCGGTGTACTCGGCATCGGAACTGGC
CGCCCGCGAGTTCCCGGACCTGGACGTGTCGATCCGTGGCGCCGTGTCGATTGCCCGCCGCCTGCAGGACCCGCTGGCCG
AGCTGGTGAAGATCGACCCGAAATCCATCGGCGTCGGCCAGTACCAGCACGACGTTTCCCAGCTGAAACTGGCGCGTGGC
CTGGACGCCGTGGTCGAGGACTGCGTGAACGCCGTGGGCGTGGACGTCAACACCGCCTCGGTGGCGCTGCTGACCCGTAT
CTCCGGCCTCAACGCCACACTGGCACAGAACATCGTCGCCCACCGCGATGCCAACGGCCCGTTTGCCACCCGTGCAGCGC
TGAAAAAAGTCAGCCGCCTGGGTGAAAAAACCTTCGAACAAGCAGCCGGCTTCCTGCGTGTAATGAACGGCGACAACCCG
CTGGACGCCTCCGCAGTGCACCCGGAGGCCTATCCGCTGGTGCAGCGCATCGCCGCCGACACCGACCGCGATATCCGCTC
GCTGATCGGCGACAGCAGCTTCCTCAAGCGCCTGGACCCCAAGAAGTTCACCGACGAGTCCTTCGGCCTGCCGACCGTCA
CCGACATCCTGCAAGAGCTGGACAAGCCTGGCCGCGACCCACGCCCAGAGTTCAAGACCGCCACCTTCCAGGACGGCGTC
GAAGACCTCAAGGACCTGGAGCCCGGCATGATCCTGGAGGGCGTGGTGACCAACGTCACCAACTTCGGTGCCTTCGTCGA
CATCGGCGTGCACCAGGACGGCCTGGTGCACATCTCGGCGCTGTCGGAGAAGTTCATCAAAGACCCGCGTGAAGCGGTGA
AGGCCGGCGACGTGGTCAAGGTCAAGGTCATGGAAGTGGACATCTCGCGCAAGCGCGTCGGCCTGTCCATGCGCATGGGC
GACACCCCAGGCGAGAAGGTCGAAGGCAACCGCGGTGGCAACCGTGGCAATGGCGGCAACCGCCAGCAGCCAGCCCAACG
CCCGCGTGAAACCGCCACTGCAGCACCGGCCAACAATGCCATGGCCTCGCTGTTCGCCAACGCCAAGCAGTTGAAGAAGA
AGTGA

Protein sequence :
MDSINSRIAEELGVRPQQVEAAVGLLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDDRRASILASIEEQGK
LTPELAREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGDLADGLFNDPNLAPESEAARFVNAEKGVADVKAALEGA
KYILMERFAEDAALLDKLRSFLKQEAVLSARVVAGKEEEGAKFRDYFAHDELLRNAPSHRALAIFRGRNEGVLSASLKVG
EELPGTLHPCEVMIGNHVGIENRSRPADKWLGEVVRWTWKVKLYTHLETDLFGELRDNAEGEAINVFAHNLHDLLLAAPA
GPRATLGFDPGLRTGCKIAVVDATGKLLDYTTVYPHAPKNDWDRTISIMAALCAKHSVELIAIGNGTASRESDKLVAELV
KKYPALKITKIMVSEAGASVYSASELAAREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLTRISGLNATLAQNIVAHRDANGPFATRAALKKVSRLGEKTFEQAAGFLRVMNGDNP
LDASAVHPEAYPLVQRIAADTDRDIRSLIGDSSFLKRLDPKKFTDESFGLPTVTDILQELDKPGRDPRPEFKTATFQDGV
EDLKDLEPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDISRKRVGLSMRMG
DTPGEKVEGNRGGNRGNGGNRQQPAQRPRETATAAPANNAMASLFANAKQLKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 63