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Name : clpV (PP4_24500) Accession : YP_008113487.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Virulence Product : putative type VI secretion system ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 2791225 - 2793822 bp Length : 2598 bp Strand : - Note : - DNA sequence : GTGAACCTGAAGTCGCTGTTCGCCAAGCTCAACGAAACCAGCCGCACGGCCACCGAAAGCGCAGCGGCCCTCTGCCTGTC AGAGCACCACTACGATGTCGAGGTGGAACACCTGCTGCTGCAGTTGCTCGACACCGGTGACAATGACCTGGCCCCGATCC TGCGCCACTATGAGGTGGTCGCCGAGCGCCTGCAGGCGCAGCTGGTCACCGCCCTGGGCACGTTCAAGAAAGGCAATACC CGCACCCCGGCGCTGTCGCCGCACATTACCCGCATGATCGAGCAGGCCTGGCTGCTGGCGTCCATCGAGTATGGCGTCGG CCAGGTGCGCAGCGGCCACTTGCTGCAAGCCCTGCTCGACGACGCCGAACTGCGCCGGGTGGTCGTTGCCTCGGCGCCGG AGCTGGAAAAAATCAATGCCAACGACCTGCGCCTGAACCTCGCCGCGCTCGTCGAAGGCAGCGCCGAGTCCCGCCAGGCA AGCGCCCTGGCCAGCCCGGCGGCACCGGTGGCCAACAGCAGCAAGGCAGGCGGCAAGACCCCTGCGCTGGACCAGTACAC CGTCAACCTCACCCAAAGTGCACGCGAAGGCCGCATCGACCCAGTGCTGGGCCGTGAGTTCGAAGTGCGGCAGATGGTCG ACATCCTCACCCGCCGCCGGCAGAACAACCCGATCCTCACCGGTGAAGCTGGCGTTGGCAAAACCGCCGTGGTCGAAGGC CTGGCCCTGCGCATCGCCCAGGGCGACGTGCCAGCTGTGCTCAAGAACGTTGCCGTGCATACCCTCGACCTTGGCCTGCT GCAAGCCGGCGCCGGGGTAAAGGGTGAGTTCGAAAACCGCCTGAAGGCGGTCATCGAAGAGGTCAAACGCAGCCTGCACC CGATCATCCTGTTCATCGACGAAGCCCACACCCTGATCGGCTCTGGCGGCCAGGCCGGGCAGAACGACGCTGCCAACCTG CTCAAGCCGGCGTTGGCGCGTGGCGAACTGCGTACCATCGCCGCCACCACCTGGGCCGAGTACAAGAAGTATTTCGAGAA GGACGCCGCCCTCGCCCGCCGCTTCCAGGTGGTAAAGGTCGAAGAGCCTGACGAGGACAAGGCCATTCACATGTTGCGCG GGCTGCTGGGCAAGATGCGCGAGCACCACAAGGTGGCGGTGATGGACGAAGCGCTGGTGCAGGCGGTGCGCCTGTCCAGC CGCTACATCACCGGGCGCCAGCTGCCTGACAAGGCGGTCAGCGTGCTCGACACCGCCTGTGCGCGCATTGCCCTGGCACA ATCGTCGCAGCCTGGCTTGCTGGAAGACTGCCGTCGACAGATCGACAACCTGCAGGCAGAAATTGACGTGCTCGGCCACG AAGCTGGCAAAGGCCACGACCATGCCCGCCGCTTGAGTGAGCTGCAGGCCAGCCTGCAGGCCAAACAGCAGCAGGAACAG CAATTGAACGAGCAGTGGCAGCAAGAGCTGGCGCTGGTCGAACAGCTCAAGGCGCTGGATGCCGCCAACGACGCCGATGC CGGGCAGCTCAATAGCCTGCGCGCCGAACTGGCTCGCGTGCAAGGCGACCAGCCACTGGTGCACGCGCTGGTCGACAGCG GCGCCATCGCCCAGGTCATCAGCGGCTGGACCGGCATCCCGCTGGGCAAGATGCTGCGTGACGAAATCGACACCGTACAG CGCCTGCCCGCCCTGCTCGGCGAGCGCGTGCTGGGCCAGGACCATGCCCTGCACGAAATCGGCAAGCGCATCAAGATTTC CCGGGCGCGCATGGAAGACCCGAACAAGCCGATCGGTGTGTTCCTGCTGCTCGGCCCCAGCGGCGTCGGCAAGACCGAAA CCGCCCTGGCCCTGGCCGATACCCTGTACGGCGGCGAGCGCAACCTGATCACCATCAACATGTCCGAATACCAGGAGGCT CACACCGTGTCGAGCCTCAAGGGCTCGCCACCCGGCTACGTCGGCTATGGCGAAGGCGGCGTGCTGACCGAGGCGGTGCG CCGCAAACCGTACAGCGTGGTGCTGCTCGACGAGGTTGAAAAAGCCCACCCGGACGTGCTCGAACTGTTCTTCCAGGTAT TCGACAAGGGCGTACTGGACGACGGTGAAGGCCGCGAAATCAATTTCCGCAACACGGTGATCATCCTCACCTCCAACACT GGCACCGAGCGCATCATGCAGACCTGCCTGAATGCCACCGAGCTCCCCACGCCGCAGGCCATCGTCGAAGGCCTGCGCGA CGAACTCAATCATGTGTTCAAGCCGGCCTTCCTTGGCCGCCTGAGCATCGTGCCGTTCTACCCGGTGCAGGACCAGATCC TGGAGCGCATCGTCGCCCTCAAGCTCGCGCGCATCGCCAAGCGCTTCGCCCGCAACCACCAGGCCGAACTGAGCTACGAC GAGGCGCTGGTCAAAGCTATCGCTGCGCGCTGCACCGAGGTCGACAGCGGTGCGCGCAATATCGACAACATTCTGTCCCA GACCTTGATGCCCGAACTCGCCCAGCGCGTGCTCGAACGCATGGCCCAGGACACGCCCATCGAACGCCTGGTGATCGAAT TGGGCAGCGATGGCGACTTTGCCTATCGCCTGGCCTGA Protein sequence : MNLKSLFAKLNETSRTATESAAALCLSEHHYDVEVEHLLLQLLDTGDNDLAPILRHYEVVAERLQAQLVTALGTFKKGNT RTPALSPHITRMIEQAWLLASIEYGVGQVRSGHLLQALLDDAELRRVVVASAPELEKINANDLRLNLAALVEGSAESRQA SALASPAAPVANSSKAGGKTPALDQYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEG LALRIAQGDVPAVLKNVAVHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDEAHTLIGSGGQAGQNDAANL LKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSS RYITGRQLPDKAVSVLDTACARIALAQSSQPGLLEDCRRQIDNLQAEIDVLGHEAGKGHDHARRLSELQASLQAKQQQEQ QLNEQWQQELALVEQLKALDAANDADAGQLNSLRAELARVQGDQPLVHALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQ RLPALLGERVLGQDHALHEIGKRIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEA HTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVIILTSNT GTERIMQTCLNATELPTPQAIVEGLRDELNHVFKPAFLGRLSIVPFYPVQDQILERIVALKLARIAKRFARNHQAELSYD EALVKAIAARCTEVDSGARNIDNILSQTLMPELAQRVLERMAQDTPIERLVIELGSDGDFAYRLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-164 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_008113487.1 | putative type VI secretion system ATPase | VFG2084 | Protein | 8e-149 | 45 |
