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Name : PP4_23780 (PP4_23780) Accession : YP_008113415.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Virulence Product : putative general secretory pathway protein Function : - COG functional category : - COG ID : - EC number : - Position : 2705946 - 2707619 bp Length : 1674 bp Strand : + Note : - DNA sequence : ATGCCCGCGAAGAATCCGGCACCATTCTCGGCCTACCCCCGCGACCTGCTGGCCCAGGCCCGTCTGCAAGCCAGCGACGA GCGCCTGCTCAACTGCCTCGAACGCCTTGCTTGCGACAACCCCGCTACCTTCACCCGACGCCTGGGCCTGACCCTGCATT ACCCGGTGCTGGACAGCCACACCCTGCTGGCCAGCAGCCCACGCTTTGACAAGGTCAGCCTAGCCGCGTGCCTGAAGCGC GAATTCGTGCTGATCGAGCAGGGCGGCCAGCTGTTGGGCGTGTTCGCCGACCCCTTCGACCCCGCCCGCCTGGCCTGGAT CGATGATGTACTGCAAGGCGCGCCGCTGTACCTGGCCCACGCCGCCGAACTGGCCACCTTCCTTGCCCGCCACGAAGAAA GCTTCCACGCCGTCGATGCCCTCGACCATGACGCCGAGGCCAGCAGCGAAGGCGACCCGCTGCAACGCCTTTCGCTGGCC AGCATCAGCGAAGACCAGAGCCGCGTGGTCAAGCTGGTCAACTCCACCCTGTACGACGCCCTCAAGCTGCACGCCAGCGA CATCCACCTGGGCATGACCGGCCAGGGCCTGACCATCAAGTACCGCATCGACGGCGTGCTCAACGGCGCCGGCAAGGCCA GTGGCAGCGCCTTCGCCGACCAGGTGATCTCGCGCATCAAGGTCATGGCCGAACTGGACATTGGCGAAAAACGCGTGCCC CAGGACGGCCGCTTCAAGGTTGCCGTGGGTGACCGGCAAATCGATTTCAGGGTATCGATCATGCCCAGCATCTTTGGCGA AGACGCCGTGCTGCGGGTGCTCGACAAGCAGGACTTGTCCGACCGGGTCAGCGGCGTGCAACTGCAGGCCCTGGGCTTTG CCGACGAAACCCTGCGCGCGCTGCGCCGGCTGGCTGCCGAACCCTACGGCATGATCCTGGTCACCGGCCCCACCGGCAGC GGCAAGACCACCACCCTGTACGCCATGATCAGCGAGATCAACCACGGCGTGGACAAGATCATCACCATCGAAGACCCGGT CGAGTACCAACTGCCCGGCGTGTTGCAGATCCCGGTCAACGAGAAGAAGGGCCTGACCTTCGCCCGCGGCCTGCGCTCCA TCTTGCGCCACGACCCGGACAAGATCCTGGTGGGTGAGATCCGCGACCCGGACACCGCGCAAATTGCCGTGCAGTCGGCG CTCACCGGCCACCTGGTGTTCACCACCATCCACGCCAACAACGTATTCGACGTGATCGGCCGCTTCAGCCAGATGCAGGT CGACCCCTACAGCTTTGTTTCCGCGCTGAACGCGGTGCTGGCCCAGCGCCTGATCCGCCTGGCCTGCACCCATTGCTCCA GCCCCTGCGAGGTGGATGACGACACCCTGTACGGCTCGGGCCTGACCCGTGAGGGCGTGGCCGGCTGGAAGTTCGTCCGC GTGCAGGGCTGCGGCCAGTGCCGGGGCAGCGGCTTTCGCGGCCGCAGCGCCATCGCCGAACTGCTGCACCTGGACGACGA CCTGCGGCAGATGATTGTCGAGCGCCGCCCCCTCTCGCAAATCAAGACCCTCGCCTGCCAGCGTGGCCTGCGCCTGCTGC GGGCTTCGGCCCTGGACCTGGTCCGCGATGGCCGCACCACCCTTGAGGAGATCAACCGTGTCACATTCATCTGA Protein sequence : MPAKNPAPFSAYPRDLLAQARLQASDERLLNCLERLACDNPATFTRRLGLTLHYPVLDSHTLLASSPRFDKVSLAACLKR EFVLIEQGGQLLGVFADPFDPARLAWIDDVLQGAPLYLAHAAELATFLARHEESFHAVDALDHDAEASSEGDPLQRLSLA SISEDQSRVVKLVNSTLYDALKLHASDIHLGMTGQGLTIKYRIDGVLNGAGKASGSAFADQVISRIKVMAELDIGEKRVP QDGRFKVAVGDRQIDFRVSIMPSIFGEDAVLRVLDKQDLSDRVSGVQLQALGFADETLRALRRLAAEPYGMILVTGPTGS GKTTTLYAMISEINHGVDKIITIEDPVEYQLPGVLQIPVNEKKGLTFARGLRSILRHDPDKILVGEIRDPDTAQIAVQSA LTGHLVFTTIHANNVFDVIGRFSQMQVDPYSFVSALNAVLAQRLIRLACTHCSSPCEVDDDTLYGSGLTREGVAGWKFVR VQGCGQCRGSGFRGRSAIAELLHLDDDLRQMIVERRPLSQIKTLACQRGLRLLRASALDLVRDGRTTLEEINRVTFI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-74 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-75 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PP4_23780 | YP_008113415.1 | putative general secretory pathway protein | VFG2048 | Protein | 1e-75 | 44 |
| PP4_23780 | YP_008113415.1 | putative general secretory pathway protein | VFG0182 | Protein | 8e-74 | 44 |
| PP4_23780 | YP_008113415.1 | putative general secretory pathway protein | VFG2426 | Protein | 4e-69 | 41 |
| PP4_23780 | YP_008113415.1 | putative general secretory pathway protein | VFG1880 | Protein | 3e-65 | 41 |
