Name : gabD (PP4_20680) Accession : YP_008113105.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase GabD Function : - COG functional category : - COG ID : - EC number : - Position : 2344121 - 2345569 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGAAACTTGCCGATCGTGATCTGCTGCGTGAAGTTTGCTATATCGATGGAAAATGGCTGGCGGCTGACAGCGGCCAGCG CATTGCCGTGACCAACCCGGCCACCGGCCAAGTGCTGGGCCATGTGCCGCGGATGGGGGCAGAAGAAACCCGCCGTGCCA TCGCGGCTGCCGAGTGCGCCTTGCCAGCGTGGCGGGCGCTGACTGCCAAGGAGCGTGCCGCCCGGCTGCAGGCCTGGTTC CGTGAAATCCTCGCTCATCAGGAAGACCTGGCGCGCATCATGACCGCCGAGCAGGGCAAGCCGCTGGCCGAATCCCGTGG CGAGATTGCCTTTGCCGCCGCTTATGTAGAGTTCTATGCCGAGGAAGGCAAACGCATCTATGGCGATGTGATTCCTTCGC CGAACGCTGATCGGCGCTTGATCGTGACCAAGGAGCCGATTGGTGTGTGTGCGGCGATTACACCTTGGAACTTCCCGGCG GCGATGATCACCCGCAAGGCGGCGCCGGCTTTGGCGGCGGGCTGCACGTTGGTGCTCAAGCCCGCTTCGCAAACCCCGTT CAGCGCGCTGGCACTGTGCGTGCTGGCTGAGCGTGCCGGTATCCCGGTGGGTGTGCTCAGCGTGGTGACGGGCGATTCGG CGGCCATTGGCGGCGAGCTGACGGCCAGCCCGGTGGTGCGCAAGTTGTCGTTCACCGGCTCGACCCCCATCGGCATCCAG TTGCTGCAGCAGTCGGCGGCAACGGTGAAGAAGGTGACCATGGAGCTGGGCGGCAACGCCCCGTTCATCGTGTTCGACGA TGCCGACCTGGAAAAGGCGGTGGAAGGCGCGCTGATCGCCAAGTTCCGCAACAGCGGGCAGACCTGCGTGTGCGCCAACC GCTTCTATATCCAGGACGGCATCTACGAGCGCTTCGTGGCGCGCTTTGCCGAGCGCGTGGGTGAGCTGGTCGTCGGGCGG GGCGATGCACCAGGTACACAGGTCGGGCCGATGATCGACGGGCGTGCGGCCAGTGGTGTCGAACGGCTGGTCGGCGAGGC TGTGGAGGCCGGTGCGCGGGTGGTGACGGGAGGGCGTCGGCACGCGATGGGCGAGGCCTTCTTCGAGCCGACCTTGCTGG CGGATGTGGCGCCGGACATGCGCGTGGCGCGCGAGGAAATTTTCGGGCCGGTGGCGCCGATCTTCCGCTTCGGCAGTGAG GAGGAGGTGATTGCCCAGGCCAACGACACCGAGTTCGGCCTGGCCTGCTACCTCTATGCCCGGGATGTCGGGCGCATCTG GCGGGTGACGGAAGCGCTGGAGTACGGCATGGTCGGGGTCAACGTCGGCGTGGTGGCGACCGAAGTGGCGCCGTTTGGTG GGGTGAAGGCCTCGGGGTTGGGCAGGGAAGGGTCACGCTACGGGATCGAGGATTACCTGGAGCTCAAGTATGTGTGCCTT GGGCTATAA Protein sequence : MKLADRDLLREVCYIDGKWLAADSGQRIAVTNPATGQVLGHVPRMGAEETRRAIAAAECALPAWRALTAKERAARLQAWF REILAHQEDLARIMTAEQGKPLAESRGEIAFAAAYVEFYAEEGKRIYGDVIPSPNADRRLIVTKEPIGVCAAITPWNFPA AMITRKAAPALAAGCTLVLKPASQTPFSALALCVLAERAGIPVGVLSVVTGDSAAIGGELTASPVVRKLSFTGSTPIGIQ LLQQSAATVKKVTMELGGNAPFIVFDDADLEKAVEGALIAKFRNSGQTCVCANRFYIQDGIYERFVARFAERVGELVVGR GDAPGTQVGPMIDGRAASGVERLVGEAVEAGARVVTGGRRHAMGEAFFEPTLLADVAPDMRVAREEIFGPVAPIFRFGSE EEVIAQANDTEFGLACYLYARDVGRIWRVTEALEYGMVGVNVGVVATEVAPFGGVKASGLGREGSRYGIEDYLELKYVCL GL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-120 | 63 |