Gene Information

Name : PP4_19610 (PP4_19610)
Accession : YP_008112998.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2236291 - 2237169 bp
Length : 879 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACGCACGCAACGCATGGAGCAAACCCGCTGGGACCTGGCCTTGCGCTACCGGTTGATCGAGACGGTGGTCTGGTG
GGAAGGTCGGCTGACCACCAATCACCTGATCCAGAGCTTCGGCATCAGCCGCCAGCAGGCGTCGAAGGACATCAACACCT
ACATCAATGACTACGCGTCGAAAAACCTGGTCTACGACAAGCAGATCAAAGGCTATGTCCCGACCCGACAGTTCAAGCCG
CTGTTCATCGACGACAGCGCCAGCGCCTACCTCGACCTGCTCAACCAGAACAACGAACGCGCCCCACATATCGAAGGCCT
GGCCTTGGCCTATGCCCACACCGAAGTGCTGAAGGTGCCCGACCGCTCGGTCAAACCCGAGGTCCTGCGGCCGTTGCTCA
AGGCCTGCCGCGAAAAGCGTCGCCTGGACATCGACTACGTGTCGTTCAACACCCCCGAACTCGAGGGACGCATCATCGCC
CCGCACACGCTGGTGTACACCGGCATGCGCTGGCACGTGCGGGCCTATTGCGAAAAGAACCGCATGTACCGCGACTTTGT
ACTCAGCCGTTTCCGTGGTGTGCCAGATGTGCACGAGGAGGAGACCGAGAATGGTATCGACCAGGACGTGGAATGGAACA
CACCGGTCGATGTGATCTTCAAGCCGGACGAACGCCTGACACCCGCGCAGCGGGCCATCATCGAGGTGGACTACGGCATG
ACCGACGGGCAGTTGGTGGTGGGCAGCTCCCAGGCATTGGTCAAGTATGTGGTGAAGCGCTTCGGGGTGAACCCCAACAT
GCATGATGCAAGGCCCGAAGCGCAGCAGCTGGTGCTGGCGAACCGGGCCGAACTGAAGCCTTGGCTGAACCTTGATTGA

Protein sequence : 
MKRTQRMEQTRWDLALRYRLIETVVWWEGRLTTNHLIQSFGISRQQASKDINTYINDYASKNLVYDKQIKGYVPTRQFKP
LFIDDSASAYLDLLNQNNERAPHIEGLALAYAHTEVLKVPDRSVKPEVLRPLLKACREKRRLDIDYVSFNTPELEGRIIA
PHTLVYTGMRWHVRAYCEKNRMYRDFVLSRFRGVPDVHEEETENGIDQDVEWNTPVDVIFKPDERLTPAQRAIIEVDYGM
TDGQLVVGSSQALVKYVVKRFGVNPNMHDARPEAQQLVLANRAELKPWLNLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1772 NP_231407.1 hypothetical protein Not tested VPI-2 Protein 2e-71 51
VC0395_A1370 YP_001217313.1 hypothetical protein Not tested VPI-2 Protein 2e-71 51
VPI2_0020 ACA01837.1 hypothetical protein Not tested VPI-2 Protein 2e-70 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_19610 YP_008112998.1 putative transcriptional regulator VFG1105 Protein 7e-72 51