Gene Information

Name : PP4_18360 (PP4_18360)
Accession : YP_008112873.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : putative two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2108434 - 2109096 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
ATGCGGCTTTTGCTGGTTGAGGACGATATCGCACTGGGAGAGGGGATCTGCGACGGTTTGCGCCAGCAGGGCTACACCCT
CGACTGGTTGCGGGACGGTGTCAGTGGTTTGCATGCGTTGCAGCACGAGAGCTTCGACCTGGTGATCCTGGATCTTGGAT
TACCGCGCATGAATGGCATTGAACTCCTGCGGCGGGTACGCGCCGGCGGCGACAGCCTTCCGGTGCTGATCCTCACCGCA
CGGGATGCCCTCGATGATCGCATCACCGGCCTCGATGCCGGCGCCGACGATTACCTGGTCAAGCCGTTCGACCTCAACGA
GCTGAAGGCACGCTTGCGCGCGTTGCTAAGGCGCAGCGCCGGCCGCGCCAAGGTCATGATCGAGCATGCCGGCGTCAGCC
TCGACCCAGCTACCCAGCAAGTTCATTACAACGGCGTCGAAGTGGTGCTGACCCCCAAGGAATACATGCTATTGCACGAG
TTGCTGGCGCAGCCGGGCAAGGTTTTCACCCGCGAACGCCTGACCCAGCTGCTGTATGGCTGGGATGAGGAACCCGAGAG
CAATACGCTGGAGGTGAATATCTACCAGCTGCGCAAAAAGCTGTTCAACGGGCTGATCCGTACGGTGCGCGGCATTGGCT
ATCTGGTCGAGGCCAAGGCATGA

Protein sequence : 
MRLLLVEDDIALGEGICDGLRQQGYTLDWLRDGVSGLHALQHESFDLVILDLGLPRMNGIELLRRVRAGGDSLPVLILTA
RDALDDRITGLDAGADDYLVKPFDLNELKARLRALLRRSAGRAKVMIEHAGVSLDPATQQVHYNGVEVVLTPKEYMLLHE
LLAQPGKVFTRERLTQLLYGWDEEPESNTLEVNIYQLRKKLFNGLIRTVRGIGYLVEAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-30 45
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_18360 YP_008112873.1 putative two-component response regulator BAC0487 Protein 8e-32 48
PP4_18360 YP_008112873.1 putative two-component response regulator NC_002516.2.879194.p Protein 5e-27 43
PP4_18360 YP_008112873.1 putative two-component response regulator BAC0197 Protein 3e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_18360 YP_008112873.1 putative two-component response regulator VFG0473 Protein 2e-36 47
PP4_18360 YP_008112873.1 putative two-component response regulator VFG0596 Protein 1e-26 41