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Name : fliR (PP4_16710) Accession : YP_008112708.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliR Function : - COG functional category : - COG ID : - EC number : - Position : 1938541 - 1939320 bp Length : 780 bp Strand : + Note : - DNA sequence : ATGAACGTAAGCCTTTTTTTTGACCTGCATGGCTGGCTGGCCGGTGCGGTGATTTGCTTCGCTCGCCTGGCACCGGTGTT TTTCATGTTGCCGTTTCTCAACAGCCGCGTGCTTACCGGAGCACCACGAAACGCCGTGATTGTGCTGGTTGGCATGGCGC TCTGGCCTTATACCGCCGGTACGCTGCCCCGTCTGGACTCGCTTGGCTTCTACGGGTTGTTGTTGCGGGAGGCCGGAGTG GGCGTGATTCTCGGCTGCCTGTTGTCCTGGCCGTTCTGGTTGTTGCACGCCATGGGCAACCTGATCGATAACCAGCGCGG AGCGATGCTCAGTAGCACAGTCGATCCGGCCAACGGCGACGACACCTCGGAGCTGGCCAATTTTCTCCAGCTGTTCGCGG CAGTGATCTACCTGGAGGGTGGGGGCATGAGGTTGCTGGTGGAAACCCTGAGCCGCAGCTACCAACTCTGCTCGCCGGTA TCCGGATGCGAACTGCAGATCCAGCCGTTGCTCGGGCTGCTCGATCCGTTGATCAGCAAAACGCTGATCATCAGTGCACC GGTGGTGGCGACCTTGTTGCTCACCGAGGCGCTGCTCGGCCTACTGGCGCGTTTTGCGCCGCAAATGAACGCGTTTTCAG TGTCGCTCACTGTAAAGGGAGCCATCGCGTTACTGGTGTTGATTCAGTATCTGGGTGTTCACCTGCCGGACGAAATACTG CGCATGGCCATCAAGCCGGATCAGCTTGCCCAGTGGTTCGTACTGCCAGAGGCCCACTGA Protein sequence : MNVSLFFDLHGWLAGAVICFARLAPVFFMLPFLNSRVLTGAPRNAVIVLVGMALWPYTAGTLPRLDSLGFYGLLLREAGV GVILGCLLSWPFWLLHAMGNLIDNQRGAMLSSTVDPANGDDTSELANFLQLFAAVIYLEGGGMRLLVETLSRSYQLCSPV SGCELQIQPLLGLLDPLISKTLIISAPVVATLLLTEALLGLLARFAPQMNAFSVSLTVKGAIALLVLIQYLGVHLPDEIL RMAIKPDQLAQWFVLPEAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 2e-59 | 54 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 2e-59 | 54 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 5e-60 | 54 |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 2e-58 | 53 |
| spaR | AAS66867.1 | SpaR | Not tested | SSR-2 | Protein | 1e-36 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliR | YP_008112708.1 | flagellar biosynthetic protein FliR | VFG0549 | Protein | 2e-60 | 54 |
| fliR | YP_008112708.1 | flagellar biosynthetic protein FliR | VFG1014 | Protein | 3e-36 | 48 |
| fliR | YP_008112708.1 | flagellar biosynthetic protein FliR | VFG2453 | Protein | 1e-32 | 43 |
