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Name : fliP (PP4_16690) Accession : YP_008112706.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : - COG ID : - EC number : - Position : 1937623 - 1938270 bp Length : 648 bp Strand : + Note : - DNA sequence : ATGATTGGGCTGTTGGCAGTGGCTTCATTGCTGCCATTCCTGATCGCTGCGGGCACCTGCTACATCAAGTTCTCGATTGT CTTCGTTATCGTGCGTAATGCTCTGGGCCTGCAGCAGGTGCCATCGAACATGACCCTCAACGCCGTTGCGCTGCTGCTGG CGATGTTCGTCATGAGCCCCGTGGTGCAGCAGGGCTATGACTATTACAAGGAAAATCGTGTGGAATTTACCCGCATCGAT GCGGTGGTCGACTTCCTCGATAACGGTCTGGGCGGTTATCGCGAATATCTGGCCAGGTACACCGACCCGGACCTGGCACA GTTCTTCGAGCGGGCACAGATCGCGCGCGAGGACCCGAGGGCCGTCAACAGCGAGTTCGATGAAAGGCTGGAGCCGTCGT TGTTCGCGTTGCTGCCTGCCTATGCACTGAGCGAAATCAAAGCCGCCTTCAAGATCGGTTTCTACTTGTATCTGCCTTTC GTCATCGTCGATCTGGTGGTTTCCAGTATCTTGCTTGCCCTGGGCATGATGATGATGAGCCCGGTGATCATCTCGGTACC TATCAAGCTGGTGCTGTTCGTTGCGCTGGATGGCTGGTCGCTGCTTTCTACCGGACTGGTTGGACAATACCTGTCCCTGG CTCAATGA Protein sequence : MIGLLAVASLLPFLIAAGTCYIKFSIVFVIVRNALGLQQVPSNMTLNAVALLLAMFVMSPVVQQGYDYYKENRVEFTRID AVVDFLDNGLGGYREYLARYTDPDLAQFFERAQIAREDPRAVNSEFDERLEPSLFALLPAYALSEIKAAFKIGFYLYLPF VIVDLVVSSILLALGMMMMSPVIISVPIKLVLFVALDGWSLLSTGLVGQYLSLAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaP | NP_461811.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 7e-63 | 66 |
| spaP | NP_457284.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 6e-63 | 66 |
| spaP | NP_806493.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 6e-63 | 66 |
| spaP | YP_217809.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 7e-63 | 66 |
| spaP | AAS66865.1 | SpaP | Not tested | SSR-2 | Protein | 2e-61 | 62 |
| epaP | AAZ31293.1 | EpaP | Virulence | ETT2 | Protein | 2e-57 | 60 |
| spaP | NP_311752.1 | surface presentation of antigens protein SpaP | Not tested | LIM | Protein | 3e-58 | 60 |
| ysaR | AAS66846.1 | YsaR | Not tested | SSR-1 | Protein | 2e-52 | 56 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 4e-36 | 46 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 8e-34 | 46 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 3e-34 | 46 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-34 | 46 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 2e-34 | 46 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 2e-34 | 46 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 2e-34 | 46 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 3e-34 | 45 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 2e-34 | 45 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-34 | 45 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 2e-34 | 45 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 2e-34 | 45 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 2e-34 | 45 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 8e-31 | 44 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 1e-31 | 44 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-29 | 44 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-29 | 44 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 9e-27 | 41 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 9e-27 | 41 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-26 | 41 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-26 | 41 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 7e-27 | 41 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-27 | 41 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-27 | 41 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 9e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_008112706.1 | flagellar biosynthesis protein FliP | VFG0551 | Protein | 2e-63 | 66 |
| fliP | YP_008112706.1 | flagellar biosynthesis protein FliP | VFG1012 | Protein | 4e-58 | 62 |
| fliP | YP_008112706.1 | flagellar biosynthesis protein FliP | VFG2455 | Protein | 1e-59 | 60 |
| fliP | YP_008112706.1 | flagellar biosynthesis protein FliP | VFG1773 | Protein | 1e-59 | 60 |
| fliP | YP_008112706.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 3e-36 | 47 |
| fliP | YP_008112706.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 4e-35 | 46 |
| fliP | YP_008112706.1 | flagellar biosynthesis protein FliP | VFG0715 | Protein | 4e-34 | 46 |
| fliP | YP_008112706.1 | flagellar biosynthesis protein FliP | VFG0827 | Protein | 9e-35 | 46 |
| fliP | YP_008112706.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 4e-28 | 41 |
