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Name : flhA (PP4_16640) Accession : YP_008112701.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Virulence Product : putative flagellar biosynthesis protein FlhA Function : - COG functional category : - COG ID : - EC number : - Position : 1931924 - 1933975 bp Length : 2052 bp Strand : + Note : - DNA sequence : ATGCTCGATAAATTCTTGCGCAGTATCATTTCTCGACCCGAGCTGCTGATCCTGACGCTCATGGTGATGATCATCGCCAT GCTGATCATTCCATTGCCGACGCCGCTGGTGGATTTTCTGATCGGCCTGAACATCGTCATTGCGATCCTGGTATTCATGG GCTCGTTCTACATCGAACGGATCCTGAGTTTTTCCACCTTTCCCGCGCTGTTGTTGATCACCACATTGTTCCGGCTGGCG CTATCGATAAGTACCAGTCGGCTTATCCTGGTGCAGGCGGATGCGGGCGAGATCATCGCGTCTTTTGGTGAGTTTGTAAT TGGCGACAGCCTGGTGGTGGGCTTCGTGATCTTCGCTATCGTCACCATCGTCCAGTTCATCGTCATTACCAAGGGGTCCG AGCGCGTAGCGGAAGTAGCTGCCCGGTTCTCCCTTGATGGCATGCCGGGCAAGCAAATGAGTATCGATGGCGACCTCAAG GCCGGTGTCATCGATGCCAAGGAGGCGCGTGAGCGGCGCAGTACGCTAGAGCGCGAAAGCCAGTTGTATGGATCCTTCGA TGGCGCCATGAAGTTCATCAAGGGGGACGCGATCGCCGGGATCATCATCATTTTCGTCAACTTTCTCGGGGGGATCGCAA TCGGTGTCGGGCAGCTGGGAATGGACATGTCCGAGGCGCTGTCGACCTACACATTGCTGACAATCGGTGACGGCCTTGTG GCGCAGATTCCCGCGCTGCTGATCGCCATCGGAGCGGGTTTCATCGTGACCCGGGTCAACGGAGACGAAGCCAACCTGGG GCGCAACATGATGACCCAACTGTTGGGGCATCCCTTTGTGCTGGGTATTACTGCCTTGCTCGCTGTCGGTGTGGGGATGC TGCCAGGGTTCCCGGCCGCGGTGTTTCTGATCATCGCCAGTGCATTGGTGGCCTTGCTGTTCTTTCGCCACCGGCTCGAG AAGAAAACCTCGGGTAACGCCCCCGTCACCCCTTTGGCGGCTGATGAGGGAGATGCCGAAAGTGAATTGGGCCTGATCGA GAACGTCGACAACATGGCCACCGAAACAGTCGCCTTGATGCTGCTGGTGCCGAGCGCCCGCGTCGAAGCACTGCGCGCTG CTCGGTTATGTGAGCGTTTTCGTAGTCAGTTCTTTATCGATTACGGCATCCGGATCCCCGAACCCCGATTGCGCGGTACT GACTCACTGCCGCCGGGGCAAGTCGCGGTATTGATCAACGAAGTGCGTGCAGACCAGTTCGATATCCACTTCGATCTGCT ACGTGTTGTCGATTACAAGCCGGAGCTTGAGCATCTTGGTCTGGATCTGACCACGGGTGTCGACAGCAATATGCAAACCA GCGTATGGGTGCGCAGCACCGAGCGCGAAAAACTGCAGAACCTGGGGCATCAGTTGCGTCCGGCTTACGATGAATTCTAT CGCTGCCTGGTGACCCTGCTGGCTCGCAATATTTCGGAGTTTTTCGGCGTGCAGGAAAGCAAGGTCCTGCTCGACGAGAT GGAAGCCCGCTACCCCGACCTGGTCAAAGAAGTCTATCGCCACGCGTCGGTGCAGAAAGTCGCGGAGCTGCTGCAGCGCC TGGTCGCCGAGCGTATCTCCGTGCGCAACATGAAACTGATTCTTGAAACGCTTGCTCACTGGGCTTTGCGCGAGAAGGAC GTGATTGCCTTGGTCGAGCACGTGCGCGGCGGCCTGGCGCGCTACATCAGCAACAAATTTGCCAACGGCAACGACCTGCG AGTGTTGCTGCTCTCGCCGGAGTTCGAGGACGTGGTGCGCAGGGGCATACGCCAGACCTCTACGGGCAGCTTCATCAACC TGGAGCCTTCGGCCAGCGAAGAGCTTATGGACCGGCTGGCAGTCGGGCTCGATAGCCTGCACATCCCTCAGAAAGACATG GTCATCCTGGCCTCGGTGGATGTGCGGCGCTACATCAAAAAACTGATTGAGGGCCGTTTTCGGGAGCTGGACGTGGTGTC GTTTGGTGAGATTTCCGACAGCATTTCAGTACAAGTGATCAAGACCCTTTAG Protein sequence : MLDKFLRSIISRPELLILTLMVMIIAMLIIPLPTPLVDFLIGLNIVIAILVFMGSFYIERILSFSTFPALLLITTLFRLA LSISTSRLILVQADAGEIIASFGEFVIGDSLVVGFVIFAIVTIVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDGDLK AGVIDAKEARERRSTLERESQLYGSFDGAMKFIKGDAIAGIIIIFVNFLGGIAIGVGQLGMDMSEALSTYTLLTIGDGLV AQIPALLIAIGAGFIVTRVNGDEANLGRNMMTQLLGHPFVLGITALLAVGVGMLPGFPAAVFLIIASALVALLFFRHRLE KKTSGNAPVTPLAADEGDAESELGLIENVDNMATETVALMLLVPSARVEALRAARLCERFRSQFFIDYGIRIPEPRLRGT DSLPPGQVAVLINEVRADQFDIHFDLLRVVDYKPELEHLGLDLTTGVDSNMQTSVWVRSTEREKLQNLGHQLRPAYDEFY RCLVTLLARNISEFFGVQESKVLLDEMEARYPDLVKEVYRHASVQKVAELLQRLVAERISVRNMKLILETLAHWALREKD VIALVEHVRGGLARYISNKFANGNDLRVLLLSPEFEDVVRRGIRQTSTGSFINLEPSASEELMDRLAVGLDSLHIPQKDM VILASVDVRRYIKKLIEGRFRELDVVSFGEISDSISVQVIKTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 0.0 | 66 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 0.0 | 66 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 0.0 | 66 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 0.0 | 66 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 3e-176 | 61 |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 0.0 | 58 |
| ysaV | AAS66840.1 | YsaV | Not tested | SSR-1 | Protein | 2e-161 | 53 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-118 | 44 |
| escV | YP_003223476.1 | translocator EscV | Virulence | LEE | Protein | 7e-100 | 43 |
| escV | CAC81861.1 | EscV protein | Virulence | LEE II | Protein | 9e-100 | 43 |
| escV | AAK26714.1 | EscV | Virulence | LEE | Protein | 8e-100 | 43 |
| escV | AAL57541.1 | EscV | Virulence | LEE | Protein | 8e-100 | 43 |
| escV | YP_003232152.1 | T3SS structure protein EscV | Virulence | LEE | Protein | 1e-99 | 43 |
| escV | CAI43875.1 | EscV protein | Virulence | LEE | Protein | 5e-100 | 43 |
| escV | YP_003236089.1 | putative translocator EscV | Virulence | LEE | Protein | 2e-99 | 43 |
| escV | AAC38382.1 | EscV | Virulence | LEE | Protein | 7e-100 | 43 |
| escV | AFO66414.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-94 | 42 |
| escV | AFO66296.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-94 | 42 |
| unnamed | AAL06368.1 | EscV | Virulence | LEE | Protein | 2e-99 | 42 |
| escV | AAC31514.1 | L0035 | Virulence | LEE | Protein | 1e-99 | 42 |
| escV | ACU09459.1 | EscV protein | Virulence | LEE | Protein | 1e-99 | 42 |
| escV | NP_290269.1 | hypothetical protein | Virulence | LEE | Protein | 2e-99 | 42 |
| ECs4569 | NP_312596.1 | hypothetical protein | Virulence | LEE | Protein | 2e-99 | 42 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 3e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| flhA | YP_008112701.1 | putative flagellar biosynthesis protein FlhA | VFG0557 | Protein | 0.0 | 66 |
| flhA | YP_008112701.1 | putative flagellar biosynthesis protein FlhA | VFG1006 | Protein | 0.0 | 60 |
| flhA | YP_008112701.1 | putative flagellar biosynthesis protein FlhA | VFG2461 | Protein | 2e-165 | 58 |
| flhA | YP_008112701.1 | putative flagellar biosynthesis protein FlhA | VFG1780 | Protein | 4e-177 | 55 |
| flhA | YP_008112701.1 | putative flagellar biosynthesis protein FlhA | VFG0064 | Protein | 2e-117 | 44 |
| flhA | YP_008112701.1 | putative flagellar biosynthesis protein FlhA | VFG0198 | Protein | 3e-105 | 44 |
| flhA | YP_008112701.1 | putative flagellar biosynthesis protein FlhA | VFG0729 | Protein | 4e-100 | 43 |
| flhA | YP_008112701.1 | putative flagellar biosynthesis protein FlhA | VFG0384 | Protein | 2e-116 | 43 |
| flhA | YP_008112701.1 | putative flagellar biosynthesis protein FlhA | VFG0813 | Protein | 8e-100 | 42 |
