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Name : PP4_16060 (PP4_16060) Accession : YP_008112643.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Unknown Product : putative peptide ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1867776 - 1869386 bp Length : 1611 bp Strand : - Note : - DNA sequence : ATGAGTGAACAGAACCTGATCGAAGTGCGGGACCTGGCCGTGGAGTTCGTGACCGGGGACCAGGTCAACCGGGTGGTGGA TGGCATCAGCTTTGACATCCGCAAAGGCGAGACGCTGGCGCTGGTGGGCGAAAGTGGCTCGGGCAAATCGGTCACCGCGC ACTCGATCCTGCGCCTGCTGCCCTACCCCCTGGCCAGCCACCCCAGCGGCAGCATCCGCTACGAAGGCAAGGACCTGCTG CAGCAGAACGAGAAGACCCTGCAGCGCATTCGCGGCAACCGCATTGCGATGATCTTCCAGGAGCCGATGACCTCGCTCAA CCCGCTGCACTGCATCGAGAAGCAGATCAACGAAATCCTTCTGCTGCACAAGGGCCTGACCGGCAAGGAAGCGACCGCAC GTACCCTGGAGCTGCTGGACCTGGTCGGCATTCCCGAGCCGCACAAACGCTTGAAGGCCCTGCCCCACGAACTGTCGGGC GGGCAGCGCCAACGGGTAATGATCGCCATGGCACTGGCCAACGAGCCGGAACTGCTGATTGCAGATGAACCGACCACGGC GCTGGACGTGACCGTGCAGCTGAAGATTCTCGACCTGCTCAAGGAACTGCAGGCGCGCTTGGGCATGGCGCTGCTGCTGA TCAGCCATGACCTGAACCTGGTGCGTCGCATCGCCCACCGCGTGTGCGTGATGCAGCGCGGGCAAATTGTAGAGCAAGCC GAATGCGCCACGCTGTTCAGCTCGCCACAGCACCACTACACCCAAATGCTCATAAATGCCGAGCCCAGCGGGCTGCCGGC GCACAACCCGGTGGGCTCGCCGCTGCTGGAGGTGGATGACCTCAAGGTGTGGTTCCCGATCAAGAAGGGGCTGCTGCGGC GCACGGTTGACCATGTAAAGGCCGTGGACGGGGTCAACTTCAGCTTGCCGCAAGGGCAGACGCTGGGGATTGTCGGGGAG TCCGGGTCGGGCAAGTCGACGCTCGGCCTGGCGATCCTGCGGCTGATTTCCAGCCAGGGCGGCATCCGCTTCCATGGGCA GAACCTGCAAGGGCTGAACCAGAAGGCCGTACGGCCGCTGCGGCGGGAAATGCAGGTGGTGTTCCAGGACCCGTTTGGCA GCCTGAGCCCGCGCATGTGCGTGGCGGACATTGTGGGTGAAGGGCTGCGCATTCACGGCATTGGCACCGCGCAGGAACAG GAAGCGGCGATTATCGCGGCCCTGGAGGAAGTAGGCCTGGACCCGCGCACGCGCCATCGCTACCCCCATGAGTTTTCCGG CGGGCAACGCCAGCGCATCGCCATTGCCCGGGCGCTGGTGCTGAAGCCCGCACTGATCCTGCTGGACGAACCTACGTCCG CGTTGGACCGCACCGTACAGCGGCAAGTGGTGGAATTGCTGCGTAACCTGCAGCAAAAGTACAACCTGACGTACCTGTTC ATCAGCCATGACCTGGCGGTGGTCAAGGCGCTGAGTCACCAGTTGATGGTGATCAAGCATGGGCAGGTGGTGGAGCAAGG GGATGCGCAGGCGATCTTCCATGCGCCGCAGCATCCGTATACACGGCAGTTGCTGGAGGCGGCGTTTTTAGAGGTGAATG CCGTTGGTTAG Protein sequence : MSEQNLIEVRDLAVEFVTGDQVNRVVDGISFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLASHPSGSIRYEGKDLL QQNEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLDLVGIPEPHKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA ECATLFSSPQHHYTQMLINAEPSGLPAHNPVGSPLLEVDDLKVWFPIKKGLLRRTVDHVKAVDGVNFSLPQGQTLGIVGE SGSGKSTLGLAILRLISSQGGIRFHGQNLQGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHGIGTAQEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLF ISHDLAVVKALSHQLMVIKHGQVVEQGDAQAIFHAPQHPYTRQLLEAAFLEVNAVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-77 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-77 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-77 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-77 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-98 | 42 |
