Gene Information

Name : kdpE (PP4_16000)
Accession : YP_008112637.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : two-component response regulator KdpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1859875 - 1860570 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCAGTCCGCCACCCTGTTGGTCATCGACGATGAACCGCAGATCCGCAAGTTCCTGCGCATCAGCCTGGCCTCGCA
GGGCTACAAGGTGCTCGAAGCCGCTACCGGCCAGGAAGGGCTGGCCCAGGCTGCACTGGGCAGGCCGGACCTGGTGGTGC
TCGACCTGGGCCTGCCGGACATGGACGGCCAGCAGGTGCTGCGTGAACTGCGCGAATGGAGCGCGGTGCCGGTGATGGTG
CTGTCGGTGCGCGCCAGTGAAGTGCAGAAGGTGGATGCGCTGGACGGCGGGGCCAATGACTACGTGACCAAGCCTTTTGG
CATCCAGGAATTTCTGGCGCGGGTGCGGGCCTTGCTACGCCAGGTGCCACAGGCCGGGGGCTCGGAAGTGGCAGCCAGCT
TTGGGCCACTGACCGTGGATTTTGCCTTTCGCCGGGTGACCCTGGACGGTGTGGAGGTGGCGTTGACGCGCAAGGAGTAT
GCCTTGCTGGCGCTATTGGCCGGGCACCCAGGGCGGGTGATTACCCAGCAGCAACTGCTCAAGGATGTCTGGGGGCCTAC
CCATGTAGAGAATACCCACTACCTTCGGATCGTGGTCGGGCATCTGCGGCAGAAGCTGGGCGATGACCCCACGGCGCCAC
GGTTCATCATCACCGAGGCAGGGGTGGGGTACAGATTGGTGGCGCCGATAGCCTGA

Protein sequence :
MSQSATLLVIDDEPQIRKFLRISLASQGYKVLEAATGQEGLAQAALGRPDLVVLDLGLPDMDGQQVLRELREWSAVPVMV
LSVRASEVQKVDALDGGANDYVTKPFGIQEFLARVRALLRQVPQAGGSEVAASFGPLTVDFAFRRVTLDGVEVALTRKEY
ALLALLAGHPGRVITQQQLLKDVWGPTHVENTHYLRIVVGHLRQKLGDDPTAPRFIITEAGVGYRLVAPIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 4e-32 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_008112637.1 two-component response regulator KdpE VFG1389 Protein 9e-27 43
kdpE YP_008112637.1 two-component response regulator KdpE VFG1390 Protein 2e-30 42