Gene Information

Name : PP4_15390 (PP4_15390)
Accession : YP_008112576.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : putative two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1789029 - 1789712 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGCACGTTCTGCTCTGCGAGGACGACGACCTGATCGCCGCCGGCATCTGCGCCGGCCTTACCGCCCAGGGCCTGACCGT
GGACCGGGTGGGCAATGCCGCCGATGCGCGGGCGATGCTGCAGGCCGCGCAGTTCGACGTGATGATCCTCGACCTCGGCC
TGCCCGACGAAGACGGCCTCAAGCTGCTGCGTCGCCTGCGCCAGCAGGGGGTGGACTTGCCAGTGCTGGTGCTCACTGCC
CGCGATGCCGTCACCGACCGCGTCGATGGCCTGCAGGCCGGCGCCGACGACTACCTGCTCAAGCCGTTCGACCTGCGCGA
ACTGGCCGCTCGCCTGCATACCCTGCTGCGGCGGGTGGCCGGGCGGGCGGTGAATGTGATCGAGCACGGGCCGTTGCGGT
ATGACCCCAGCAGCTGCGAGGCGAGCCTGGCCGGGCAGCCCGTCGACCTGTCCCGCCGTGAGCAGGCCTTGCTCCAGGCA
CTGCTGCAGAACCCCGGGCGGGTGCTGTCCGGCGAACAACTGAAAGACTGCGTGTACGGCTTCAGCGACGAAGTCGAAAG
CAACGCCCTGAACGTGCATATCCACCACCTGCGACGCAAGCTTGGCAACGGCATCGTCGAGACTGTGCGTGGCCTGGGTT
ACCGGCTGGGCCCGGCGCAGGCACCGGAAGAGGCTGCATCATGA

Protein sequence : 
MHVLLCEDDDLIAAGICAGLTAQGLTVDRVGNAADARAMLQAAQFDVMILDLGLPDEDGLKLLRRLRQQGVDLPVLVLTA
RDAVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRAVNVIEHGPLRYDPSSCEASLAGQPVDLSRREQALLQA
LLQNPGRVLSGEQLKDCVYGFSDEVESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPAQAPEEAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-51 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_15390 YP_008112576.1 putative two-component response regulator BAC0487 Protein 1e-29 43
PP4_15390 YP_008112576.1 putative two-component response regulator CP000647.1.gene1136. Protein 2e-24 42
PP4_15390 YP_008112576.1 putative two-component response regulator BAC0530 Protein 3e-24 42
PP4_15390 YP_008112576.1 putative two-component response regulator CP001918.1.gene2526. Protein 1e-23 41
PP4_15390 YP_008112576.1 putative two-component response regulator NC_002516.2.879194.p Protein 5e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_15390 YP_008112576.1 putative two-component response regulator VFG1389 Protein 3e-22 44
PP4_15390 YP_008112576.1 putative two-component response regulator VFG0473 Protein 1e-33 42